Evidence map›Paper›PMID 35991917›Full record

ArticleBiomedical optics express2022

Automated wide-field malaria parasite infection detection using Fourier ptychography on stain-free thin-smears.

Osman Akcakır, Lutfi Kadir Celebi, Mohd Kamil, Ahmed S I Aly

Open access · goldAbstract read
In one paragraph

Article in Biomedical optics express, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Osman AkcakırBeykoz Institute of Life Sciences and Biotechnology (BILSAB), Bezmialem Vakif University, 34820 Istanbul, Turkey.
Lutfi Kadir CelebiBeykoz Institute of Life Sciences and Biotechnology (BILSAB), Bezmialem Vakif University, 34820 Istanbul, Turkey.
Mohd KamilBeykoz Institute of Life Sciences and Biotechnology (BILSAB), Bezmialem Vakif University, 34820 Istanbul, Turkey.
Ahmed S I AlyBeykoz Institute of Life Sciences and Biotechnology (BILSAB), Bezmialem Vakif University, 34820 Istanbul, Turkey.
Bezmiâlem Vakıf Üniversitesi · TR

Funding

Selection of the Determinants of Plasmodium Sporozoite Infectivity and MotilityR21AI111058 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI ALY, AHMED SAYED IBRAHIM · 2015 to 2016
$426k
NIAID NIH HHS R21 AI111058
6 · The paper itself

Abstract

Diagnosis of malaria in endemic areas is hampered by the lack of a rapid, stain-free and sensitive method to directly identify parasites in peripheral blood. Herein, we report the use of Fourier ptychography to generate wide-field high-resolution quantitative phase images of erythrocytes infected with malaria parasites, from a whole blood sample. We are able to image thousands of erythrocytes (red blood cells) in a single field of view and make a determination of infection status of the quantitative phase image of each segmented cell based on machine learning (random forest) and deep learning (VGG16) models. Our random forest model makes use of morphology and texture based features of the quantitative phase images. In order to label the quantitative images of the cells as either infected or uninfected before training the models, we make use of a

Identifiers

PMID35991917
PMCPMC9352279
OpenAlexW4210899142

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.