Evidence map›Paper›PMID 35991696›Full record

ArticleVirusdisease2022

Tung Phan, Masaaki Kobayashi, Koo Nagasawa, Riona Hatazawa, Ngan Thi Kim Pham, Hideaki Miyashita, Satoshi Komoto, Takeshi Tajima, Tuneyoshi Baba, Shoko Okitsu and 6 more

Abstract read
In one paragraph

Article in Virusdisease, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Tung PhanDivision of Clinical Microbiology, University of Pittsburgh, University of Pittsburgh Medical Center, Pittsburgh, PA USA.ORCID 0000-0003-3517-3078
Masaaki KobayashiJapanese Virus Gastroenteritis Research Group, Nihon University School of Medicine, Tokyo, Japan.
Koo NagasawaDivision of Infectious Diseases, Chiba Children's Hospital, Chiba, Japan.
Riona HatazawaDepartment of Virology and Parasitology, Fujita Health University School of Medicine, Aichi, Japan.
Ngan Thi Kim PhamDepartment of Pathology and Microbiology, Division of Microbiology, Nihon University School of Medicine, Itabashi-ku, Tokyo, Japan.
Hideaki MiyashitaJapanese Virus Gastroenteritis Research Group, Nihon University School of Medicine, Tokyo, Japan.
Satoshi KomotoDepartment of Virology and Parasitology, Fujita Health University School of Medicine, Aichi, Japan.
Takeshi TajimaJapanese Virus Gastroenteritis Research Group, Nihon University School of Medicine, Tokyo, Japan.
Tuneyoshi BabaJapanese Virus Gastroenteritis Research Group, Nihon University School of Medicine, Tokyo, Japan.
Shoko OkitsuDepartment of Pathology and Microbiology, Division of Microbiology, Nihon University School of Medicine, Itabashi-ku, Tokyo, Japan.
Pattara KhamrinDepartment of Microbiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Niwat ManeekarnDepartment of Microbiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Hirokazu KimuraDepartment of Health Science, Graduate School of Health Science, Gunma Paz University, Gunma, Japan.
Takeshi KobayashiDepartment of Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Satoshi HayakawaDepartment of Pathology and Microbiology, Division of Microbiology, Nihon University School of Medicine, Itabashi-ku, Tokyo, Japan.
Hiroshi UshijimaDepartment of Pathology and Microbiology, Division of Microbiology, Nihon University School of Medicine, Itabashi-ku, Tokyo, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Unusual DS-1-like intergenogroup reassortant rotaviruses with a bovine-like G8 genotype (DS-1-like G8P [8] rotaviruses) have emerged and rapidly spread in several countries. In this study, the nucleotide sequences of seven human rotavirus G8P [8] strains in 2017 and 2019 in Japan were determined using viral metagenomics. Its genomic constellation (VP7-VP4-VP6-VP1-VP2-VP3-NSP1-NSP2-NSP3-NSP4-NSP5 genes) was defined as G8-P [8]-I2-R2-C2-M2-A2-N2-T2-E2-H2. Our genetic analysis revealed that the Japanese G8P [8] rotavirus strains in 2017 and 2019 were classified into the same lineages G8-5 and P [8]-3, but they were phylogenetically located on separate branches and belonged to distinct clusters. Our study is the first attempt to investigate the evolution of emerging rotavirus G8P [8] in Japan.

Indexed as

EmergenceG8P [8]Genomic analysisRotavirusWhole genome sequencing

Identifiers

PMID35991696
PMCPMC9381655

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.