Evidence map›Paper›PMID 35991528›Full record

ArticleJournal of the Royal Statistical Society. Series C, Applied statistics2022

Regularized regression on compositional trees with application to MRI analysis.

Bingkai Wang, Brian S Caffo, Xi Luo, Chin-Fu Liu, Andreia V Faria, Michael I Miller, Yi Zhao, Alzheimer’s Disease Neuroimaging Initiative‡

Abstract read
In one paragraph

Article in Journal of the Royal Statistical Society. Series C, Applied statistics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bingkai WangDepartment of Biostatistics, Johns Hopkins Bloomberg School of Public Health.
Brian S CaffoDepartment of Biostatistics, Johns Hopkins Bloomberg School of Public Health.
Xi LuoDepartment of Biostatistics and Data Science, The University of Texas Health Science Center at Houston.
Chin-Fu LiuCenter for Imaging Science, Biomedical Engineering, Johns Hopkins University.
Andreia V FariaDepartment of Radiology, Johns Hopkins University School of Medicine.
Michael I MillerCenter for Imaging Science, Biomedical Engineering, Johns Hopkins University.
Yi ZhaoDepartment of Biostatistics, Indiana University School of Medicine.
Alzheimer’s Disease Neuroimaging Initiative‡

Funding

Research Education ComponentP30AG066507 · NIA · JOHNS HOPKINS UNIVERSITY · PI Corinne Pettigrew · 2020 to 2026
$29.3M
TRD 4: Platforms for multi-modal and multi-scale imaging dataP41EB031771 · NIBIB · HUGO W. MOSER RES INST KENNEDY KRIEGER · PI Hanzhang Lu, Peter CM Van Zijl · 2021 to 2026
$9.9M
Statistical methods for structural and functional integration in multi-modal neuroimaging dataR01EB029977 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI CAFFO, BRIAN SCOTT · 2021 to 2024
$1.9M
NIA NIH HHS P30 AG066507NIBIB NIH HHS P41 EB031771NIBIB NIH HHS R01 EB029977
6 · The paper itself

Abstract

A compositional tree refers to a tree structure on a set of random variables where each random variable is a node and composition occurs at each non-leaf node of the tree. As a generalization of compositional data, compositional trees handle more complex relationships among random variables and appear in many disciplines, such as brain imaging, genomics and finance. We consider the problem of sparse regression on data that are associated with a compositional tree and propose a transformation-free tree-based regularized regression method for component selection. The regularization penalty is designed based on the tree structure and encourages a sparse tree representation. We prove that our proposed estimator for regression coefficients is both consistent and model selection consistent. In the simulation study, our method shows higher accuracy than competing methods under different scenarios. By analyzing a brain imaging data set from studies of Alzheimer's disease, our method identifies meaningful associations between memory decline and volume of brain regions that are consistent with current understanding.

Indexed as

compositionhierarchical treeregularized regression

Identifiers

PMID35991528
PMCPMC9387759

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.