Evidence map›Paper›PMID 35991345›Full record

ArticleFrontiers in neural circuits2022

Identification of adult spinal Shox2 neuronal subpopulations based on unbiased computational clustering of electrophysiological properties.

D Leonardo Garcia-Ramirez, Shayna Singh, Jenna R McGrath, Ngoc T Ha, Kimberly J Dougherty

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neural circuits, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Activity of spinal RORβ neurons is related to functional improvements following combination treatment after complete SCI.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

D Leonardo Garcia-RamirezDepartment of Neurobiology and Anatomy, Marion Murray Spinal Cord Research Center, Drexel University College of Medicine, Philadelphia, PA, United States.
Shayna SinghDepartment of Neurobiology and Anatomy, Marion Murray Spinal Cord Research Center, Drexel University College of Medicine, Philadelphia, PA, United States.
Jenna R McGrathDepartment of Neurobiology and Anatomy, Marion Murray Spinal Cord Research Center, Drexel University College of Medicine, Philadelphia, PA, United States.
Ngoc T HaDepartment of Neurobiology and Anatomy, Marion Murray Spinal Cord Research Center, Drexel University College of Medicine, Philadelphia, PA, United States.
Kimberly J DoughertyDepartment of Neurobiology and Anatomy, Marion Murray Spinal Cord Research Center, Drexel University College of Medicine, Philadelphia, PA, United States.
Drexel University · US

Funding

Crucial spinal circuit changes that mediate locomotor benefits and deficits following combined therapies after spinal cord injuryR01NS104194 · NINDS · DREXEL UNIVERSITY · PI Kimberly J Dougherty, SIMON F GISZTER · 2018 to 2026
$4.2M
Training Program on Innovative Approaches to Spinal Cord InjuryT32NS121768 · NINDS · DREXEL UNIVERSITY · PI PETER W. BAAS, Marie-Pascale Cote · 2021 to 2026
$1.3M
Specific spinal locomotor circuit alterations induced by epidural stimulationR21NS118226 · NINDS · DREXEL UNIVERSITY · PI DOUGHERTY, KIMBERLY J · 2020 to 2020
$416k
NINDS NIH HHS R01 NS104194NINDS NIH HHS R21 NS118226NINDS NIH HHS T32 NS121768
6 · The paper itself

Abstract

Spinal cord neurons integrate sensory and descending information to produce motor output. The expression of transcription factors has been used to dissect out the neuronal components of circuits underlying behaviors. However, most of the canonical populations of interneurons are heterogeneous and require additional criteria to determine functional subpopulations. Neurons expressing the transcription factor Shox2 can be subclassified based on the co-expression of the transcription factor Chx10 and each subpopulation is proposed to have a distinct connectivity and different role in locomotion. Adult Shox2 neurons have recently been shown to be diverse based on their firing properties. Here, in order to subclassify adult mouse Shox2 neurons, we performed multiple analyses of data collected from whole-cell patch clamp recordings of visually-identified Shox2 neurons from lumbar spinal slices. A smaller set of Chx10 neurons was included in the analyses for validation. We performed k-means and hierarchical unbiased clustering approaches, considering electrophysiological variables. Unlike the categorizations by firing type, the clusters displayed electrophysiological properties that could differentiate between clusters of Shox2 neurons. The presence of clusters consisting exclusively of Shox2 neurons in both clustering techniques suggests that it is possible to distinguish Shox2

Indexed as

InterneuronsNeuronsAnimalsCluster AnalysisElectrophysiological PhenomenaHomeodomain ProteinsMiceSpinal CordTranscription FactorsHomeodomain ProteinsShox2 protein, mouseTranscription Factorscluster analysiselectrophysiologyinterneuronlocomotionspinal cord

Identifiers

PMID35991345
PMCPMC9385948
OpenAlexW4289731022

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.