Evidence map›Paper›PMID 35986301›Full record

ArticleCell communication and signaling : CCS2022

Semaphorin3f as a cardiomyocyte derived regulator of heart chamber development.

Rami Halabi, Paula Bernice Cechmanek, Carrie Lynn Hehr, Sarah McFarlane

Open access · goldAbstract readVideo-Audio Media
In one paragraph

Article in Cell communication and signaling : CCS, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Zebrafish Congenital Heart Disease Models: Opportunities and Challenges.International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Rami HalabiHotchkiss Brain Institute, Alberta Children's Hospital Research Institute, Department of Cell Biology and Anatomy, University of Calgary, 3330 Hospital Dr., NW, Calgary, AB, T2N 4N1, Canada.
Paula Bernice CechmanekHotchkiss Brain Institute, Alberta Children's Hospital Research Institute, Department of Cell Biology and Anatomy, University of Calgary, 3330 Hospital Dr., NW, Calgary, AB, T2N 4N1, Canada.
Carrie Lynn HehrHotchkiss Brain Institute, Alberta Children's Hospital Research Institute, Department of Cell Biology and Anatomy, University of Calgary, 3330 Hospital Dr., NW, Calgary, AB, T2N 4N1, Canada.
Sarah McFarlaneHotchkiss Brain Institute, Alberta Children's Hospital Research Institute, Department of Cell Biology and Anatomy, University of Calgary, 3330 Hospital Dr., NW, Calgary, AB, T2N 4N1, Canada. smcfarla@ucalgary.ca.ORCID 0000-0001-9880-9980
University of Calgary · CA

Funding

CIHR
6 · The paper itself

Abstract

backgroundDuring development a pool of precursors form a heart with atrial and ventricular chambers that exhibit distinct transcriptional and electrophysiological properties. Normal development of these chambers is essential for full term survival of the fetus, and deviations result in congenital heart defects. The large number of genes that may cause congenital heart defects when mutated, and the genetic variability and penetrance of the ensuing phenotypes, reveals a need to understand the molecular mechanisms that allow for the formation of chamber-specific cardiomyocyte differentiation.

methodsWe used in situ hybridization, immunohistochemistry and functional analyses to identify the consequences of the loss of the secreted semaphorin, Sema3fb, in the development of the zebrafish heart by using two sema3fb CRISPR mutant alleles.

resultsWe find that in the developing zebrafish heart sema3fb mRNA is expressed by all cardiomyocytes, whereas mRNA for a known receptor Plexina3 (Plxna3) is expressed preferentially by ventricular cardiomyocytes. In sema3fb CRISPR zebrafish mutants, heart chamber development is impaired; the atria and ventricles of mutants are smaller in size than their wild type siblings, apparently because of differences in cell size and not cell numbers. Analysis of chamber differentiation indicates defects in chamber specific gene expression at the border between the ventricular and atrial chambers, with spillage of ventricular chamber genes into the atrium, and vice versa, and a failure to restrict specialized cardiomyocyte markers to the atrioventricular canal (AVC). The hypoplastic heart chambers are associated with decreased cardiac output and heart edema.

conclusionsBased on our data we propose a model whereby cardiomyocytes secrete a Sema cue that, because of spatially restricted expression of the receptor, signals in a ventricular chamber-specific manner to establish a distinct border between atrial and ventricular chambers that is important to produce a fully functional heart. Video abstract.

Indexed as

Heart Defects, CongenitalMyocytes, CardiacAnimalsGene Expression Regulation, DevelopmentalHeartHeart VentriclesRNA, MessengerZebrafishZebrafish ProteinsRNA, MessengerZebrafish ProteinsAtriumCRISPR mutantEdemaEmbryoPlexinSemaphorinVentricleZebrafish

Identifiers

PMID35986301
PMCPMC9389736
OpenAlexW4292336342

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.