Evidence map›Paper›PMID 35982183›Full record

ArticleScientific reports2022

Transcriptome analysis of halophyte Nitraria tangutorum reveals multiple mechanisms to enhance salt resistance.

Lirong Wang, Meng Du, Bo Wang, Huirong Duan, Benyin Zhang, Dong Wang, Yi Li, Jiuli Wang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  6. Transcriptomic Analysis of Three Differentially Senescing Maize (International journal of molecular sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Lirong WangQinghai Provincial Key Laboratory of High-Value Utilization of Characteristic Economic Plants, Qinghai Minzu University, Xining, 810007, China.
Meng DuQinghai Provincial Key Laboratory of High-Value Utilization of Characteristic Economic Plants, Qinghai Minzu University, Xining, 810007, China.
Bo WangCollege of Forestry, Gansu Agricultural University, Lanzhou, 730000, China.
Huirong DuanLanzhou Institute of Husbandry and Pharmaceutical Science, Chinese Academy of Agricultural Sciences, Lanzhou, 730000, China.
Benyin ZhangCollege of Eco-Environmental Engineering, Qinghai University, Xining, 810016, China.
Dong WangLanzhou Agriculture and Rural Affairs Bureau in Gansu Province, Lanzhou, 730030, China.
Yi LiCollege of Forestry, Gansu Agricultural University, Lanzhou, 730000, China. liyi@gsau.edu.cn.
Jiuli WangQinghai Provincial Key Laboratory of High-Value Utilization of Characteristic Economic Plants, Qinghai Minzu University, Xining, 810007, China. wangjiuli12@mails.ucas.ac.cn.
Qinghai University · CNGansu Agricultural University · CNLanzhou Institute of Husbandry and Pharmaceutical Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As a typical halophyte, Nitraria tangutorum Bobr. has attracted the interest of many researchers with the excellent salt tolerance. Elucidation of the mechanism of N. tangutorum salinity tolerance will facilitate the genetic improvement of productive plants faced with salinity. To reveal the molecular response to gradually accumulated salt stress in N. tangutorum, RNA-sequencing and analysis of gradually accumulated NaCl treated samples and control samples were performed, and a total of 1419 differentially expressed genes were identified, including 949 down-regulated genes and 470 up-regulated genes. Detailed analysis uncovered that the catabolism of organic compounds mainly based on oxidative phosphorylation genes was up-regulated. Additionally, various antioxidant genes, especially anthocyanin-related genes, were found to help N. tangutorum remove reactive oxygen species. Moreover, the Mitogen activated protein kinase signaling pathway and other signaling pathways co-regulated various salt tolerance activities. Additionally, intracellular ion homeostasis was maintained via regulation of osmotic regulator-related genes, cutin-related genes, and cell elongation-related genes to retain cellular water and reduce ion concentration. In particularly, simultaneous up-regulation in cytoskeleton-related genes, cell wall-related genes, and auxin-related genes, provided evidence of important role of cell expansion in plant salt tolerance. In conclusion, complex regulatory mechanisms modulated by multiple genes might contribute to the salt tolerance by N. tangutorum.

Indexed as

MagnoliopsidaSalt-Tolerant PlantsGene Expression ProfilingGene Expression Regulation, PlantSalt ToleranceSequence Analysis, RNATranscriptome

Identifiers

PMID35982183
PMCPMC9388663
OpenAlexW4292677388

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.