Evidence map›Paper›PMID 35981026›Full record

ArticleScience (New York, N.Y.)2022

Functional regulatory variants implicate distinct transcriptional networks in dementia.

Yonatan A Cooper, Noam Teyssier, Nina M Dräger, Qiuyu Guo, Jessica E Davis, Sydney M Sattler, Zhongan Yang, Abdulsamie Patel, Sarah Wu, Sriram Kosuri and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Science (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed, 1 pooled it
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 1 synthesis or guideline pooled it, 141 citations in OpenAlex.

  1. Pooled it
  2. Article
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  4. Mapping and rewiring thebioRxiv : the preprint server for biology · 2026
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  10. Photolytic disruption of Alzheimer's amyloid AβCommunications chemistry · 2026
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  13. Promoter mutagenesis and a massively parallel reporter screen of thebioRxiv : the preprint server for biology · 2026
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  14. Article
  15. Article
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34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Yonatan A CooperDepartment of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, CA 90095, USA.ORCID 0000-0001-8353-8516
Noam TeyssierInstitute for Neurodegenerative Diseases, University of California, San Francisco, CA 94158, USA.
Nina M DrägerInstitute for Neurodegenerative Diseases, University of California, San Francisco, CA 94158, USA.
Qiuyu GuoCenter for Neurobehavioral Genetics, Jane and Terry Semel Institute for Neuroscience and Human Behavior, University of California, Los Angeles, CA 90095, USA.ORCID 0000-0001-8549-8335
Jessica E DavisDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.ORCID 0000-0003-2625-6082
Sydney M SattlerInstitute for Neurodegenerative Diseases, University of California, San Francisco, CA 94158, USA.ORCID 0000-0002-5551-3378
Zhongan YangCenter for Neurobehavioral Genetics, Jane and Terry Semel Institute for Neuroscience and Human Behavior, University of California, Los Angeles, CA 90095, USA.ORCID 0000-0002-2996-1708
Abdulsamie PatelCenter for Neurobehavioral Genetics, Jane and Terry Semel Institute for Neuroscience and Human Behavior, University of California, Los Angeles, CA 90095, USA.
Sarah WuCenter for Neurobehavioral Genetics, Jane and Terry Semel Institute for Neuroscience and Human Behavior, University of California, Los Angeles, CA 90095, USA.
Sriram KosuriDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.ORCID 0000-0002-4661-0600
Giovanni CoppolaCenter for Neurobehavioral Genetics, Jane and Terry Semel Institute for Neuroscience and Human Behavior, University of California, Los Angeles, CA 90095, USA.ORCID 0000-0003-2105-1061
Martin KampmannInstitute for Neurodegenerative Diseases, University of California, San Francisco, CA 94158, USA.ORCID 0000-0002-3819-7019
Daniel H GeschwindDepartment of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, CA 90095, USA.ORCID 0000-0003-2896-3450
University of California, Los Angeles · USUniversity of California, San Francisco · US

Funding

UCLA-Caltech Medical Scientist Training ProgramT32GM008042 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI AJIJOLA, OLUJIMI A, DAWSON, DAVID WAYNE · 1985 to 2023
$29.9M
Uncovering the Genetic Mechanisms of the Chromosome 17q21.31 Tau Haplotype on Neurodegeneration Risk in FTD and PSPU54NS123746 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GOATE, ALISON M · 2021 to 2025
$9.4M
1/2 Cross modal integration of molecular and physiological networks in ASDU01MH115746 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GESCHWIND, DANIEL H, MEHTA, MAYANK R · 2017 to 2021
$5.3M
Impact of coding and non-coding variation in progressive supranuclear palsyUG3NS104095 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DICKSON, DENNIS WILLIAM, GESCHWIND, DANIEL H · 2017 to 2019
$3.6M
1/3 Building integrative CNS networks for genomic analysis of autismR01MH109912 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GESCHWIND, DANIEL H · 2016 to 2020
$2.6M
Impact of coding and non-coding variation in progressive supranuclear palsyUH3NS104095 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DICKSON, DENNIS WILLIAM, GESCHWIND, DANIEL H · 2020 to 2021
$2.5M
Systematic Characterization of Tauopathy-Associated Genetic Variation using Multiplexed Reporter AssaysF30AG064832 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI COOPER, YONATAN · 2019 to 2022
$177k
NIA NIH HHS F30 AG064832NIGMS NIH HHS T32 GM008042NIMH NIH HHS R01 MH109912NIMH NIH HHS U01 MH115746NINDS NIH HHS U54 NS123746NINDS NIH HHS UH3 NS104095
6 · The paper itself

Abstract

Predicting the function of noncoding variation is a major challenge in modern genetics. In this study, we used massively parallel reporter assays to screen 5706 variants identified from genome-wide association studies for both Alzheimer's disease (AD) and progressive supranuclear palsy (PSP), identifying 320 functional regulatory variants (frVars) across 27 loci, including the complex 17q21.31 region. We identified and validated multiple risk loci using CRISPR interference or excision, including complement 4 (

Indexed as

Alzheimer DiseaseChromosomes, Human, Pair 17Gene Regulatory NetworksGenetic VariationUntranslated RegionsGenes, ReporterGenetic LociGenome-Wide Association StudyHumansRisk FactorsSupranuclear Palsy, ProgressiveUntranslated Regions

Identifiers

PMID35981026
OpenAlexW4293068012

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.