Evidence map›Paper›PMID 35979918›Full record

ArticleEmerging microbes & infections2022

A variant NS1 protein from H5N2 avian influenza virus suppresses PKR activation and promotes replication and virulence in mammals.

Yun-Ting Chung, Chih-Ying Kuan, Guan-Ru Liao, Randy A Albrecht, Yeu-Yang Tseng, Yu-Chen Hsu, Shan-Chia Ou, Wei-Li Hsu

Open access · goldAbstract read
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Article in Emerging microbes & infections, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Yun-Ting ChungGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.
Chih-Ying KuanGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.
Guan-Ru LiaoGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.
Randy A AlbrechtDepartment of Microbiology, Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Yeu-Yang TsengWHO Collaborating Centre for Reference and Research on Influenza, VIDRL, Peter Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Australia.
Yu-Chen HsuGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.
Shan-Chia OuGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.
Wei-Li HsuGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.ORCID 0000-0002-1392-163X
National Chung Hsing University · TWIcahn School of Medicine at Mount Sinai · USThe University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Highly pathogenic avian influenza viruses (HPAIVs) frequently receive global attention as threats to public health. The NS1 protein is a key virulence factor known to impair host antiviral responses. The study herein revealed HPAIV H5N2 NS gene encoded additional protein; a truncated NS1 variant, designated NS3, produced by alternative splicing of the NS transcript. To examine the function of NS3 during infection, we generated recombinant viruses expressing either full-length NS1 (RG-AIV-T375G) or NS3 (RG-AIV-NS3). Interestingly, RG-AIV-NS3 virus produced higher titres than RG-AIV-T375G in multiple mammalian cell lines. However, RG-AIV-T375G exhibited a replication advantage over RG-AIV-NS3 in chicken DF-1 cells, indicating that host cell identity dictates the effect of NS3 on viral replication. In mice and mammalian cells, RG-AIV-NS3 infection elicited higher level of cytokines, including IFN-β, MX and TNF-α, potentially due to its higher replication activity. Based on mini-genome assay, NS3 had pronounced effects on viral replication machinery. Surprisingly, NS3 retained an interaction with PKR and suppressed PKR activation despite its lack of amino-acid residues 126-167. The poor replication ability of RG-AIV-T375G was partially restored in cells deficient in PKR suggesting that full-length NS1 may be insufficient to suppress PKR function. Notably, virulence of the full-length NS1-expressing RG-AIV-T375G virus was highly attenuated in mice when compared to RG-AIV-NS3. In summary, our study reveals the existence and function of a previously unidentified H5N2 viral protein, NS3. We found that NS3 is functionally distinct from NS1 protein, as it enhances viral replication and pathogenicity in mammalian systems, potentially via suppression of PKR activity.

Indexed as

Influenza A Virus, H5N2 SubtypeInfluenza in BirdsAnimalsAntiviral AgentsBirdsMammalsMiceReceptors, G-Protein-CoupledTumor Necrosis Factor-alphaViral Nonstructural ProteinsVirulenceVirulence FactorsVirus ReplicationAntiviral AgentsPKR1 protein, mouseReceptors, G-Protein-CoupledTumor Necrosis Factor-alphaViral Nonstructural ProteinsVirulence FactorscytokineHighly pathogenic avian influenza viruseshost rangeNS1NS3PKR

Identifiers

PMID35979918
PMCPMC9559317
OpenAlexW4292686157

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.