Evidence map›Paper›PMID 35977944›Full record

ArticleNature communications2022

Structural basis for proton coupled cystine transport by cystinosin.

Mark Löbel, Sacha P Salphati, Kamel El Omari, Armin Wagner, Stephen J Tucker, Joanne L Parker, Simon Newstead

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

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  19. Advances in Drug Discovery Targeting Lysosomal Membrane Proteins.Pharmaceuticals (Basel, Switzerland) · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Mark LöbelDepartment of Biochemistry, University of Oxford, Oxford, UK.ORCID 0000-0002-6558-0590
Sacha P SalphatiDepartment of Biochemistry, University of Oxford, Oxford, UK.ORCID 0000-0001-5938-5185
Kamel El OmariDiamond Light Source, Harwell Science and Innovation Campus, Didcot, UK.ORCID 0000-0003-3506-6045
Armin WagnerDiamond Light Source, Harwell Science and Innovation Campus, Didcot, UK.ORCID 0000-0001-8995-7324
Stephen J TuckerClarendon Laboratory, Department of Physics, University of Oxford, Parks Road, Oxford, UK.ORCID 0000-0001-8996-2000
Joanne L ParkerDepartment of Biochemistry, University of Oxford, Oxford, UK. Joanne.parker@bioch.ox.ac.uk.ORCID 0000-0003-2964-2720
Simon NewsteadDepartment of Biochemistry, University of Oxford, Oxford, UK. Simon.newstead@bioch.ox.ac.uk.ORCID 0000-0001-7432-2270
University of Oxford · GBDiamond Light Source · GB

Funding

Biotechnology and Biological Sciences Research Council BB/T002018/1Biotechnology and Biological Sciences Research Council BB/T008784/1Medical Research Council MR/2294159/1Medical Research Council MR/S021043/1Wellcome TrustWellcome Trust 215519Wellcome Trust 219531/Z/19/Z
6 · The paper itself

Abstract

Amino acid transporters play a key role controlling the flow of nutrients across the lysosomal membrane and regulating metabolism in the cell. Mutations in the gene encoding the transporter cystinosin result in cystinosis, an autosomal recessive metabolic disorder characterised by the accumulation of cystine crystals in the lysosome. Cystinosin is a member of the PQ-loop family of solute carrier (SLC) transporters and uses the proton gradient to drive cystine export into the cytoplasm. However, the molecular basis for cystinosin function remains elusive, hampering efforts to develop novel treatments for cystinosis and understand the mechanisms of ion driven transport in the PQ-loop family. To address these questions, we present the crystal structures of cystinosin from Arabidopsis thaliana in both apo and cystine bound states. Using a combination of in vitro and in vivo based assays, we establish a mechanism for cystine recognition and proton coupled transport. Mutational mapping and functional characterisation of human cystinosin further provide a framework for understanding the molecular impact of disease-causing mutations.

Indexed as

Amino Acid Transport Systems, NeutralCystinosisBiological TransportCystineHumansLysosomesProtonsAmino Acid Transport Systems, NeutralCystineProtons

Identifiers

PMID35977944
PMCPMC9385667
OpenAlexW4292117557

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.