Evidence map›Paper›PMID 35977930›Full record

ArticleCell death & disease2022

Multiomics characterization implicates PTK7 in ovarian cancer EMT and cell plasticity and offers strategies for therapeutic intervention.

Juuli Raivola, Alice Dini, Hanna Karvonen, Emilia Piki, Kari Salokas, Wilhelmiina Niininen, Laura Kaleva, Kaiyang Zhang, Mariliina Arjama, Greta Gudoityte and 6 more

Open access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

Juuli RaivolaApplied Tumor Genomics, Research Program Unit, Faculty of Medicine, University of Helsinki, 00014, Helsinki, Finland.
Alice DiniApplied Tumor Genomics, Research Program Unit, Faculty of Medicine, University of Helsinki, 00014, Helsinki, Finland.ORCID 0000-0002-2720-4551
Hanna KarvonenCancer Signaling, Faculty of Medicine and Health Technology, Tampere University, 33014, Tampere, Finland.ORCID 0000-0002-7815-0709
Emilia PikiApplied Tumor Genomics, Research Program Unit, Faculty of Medicine, University of Helsinki, 00014, Helsinki, Finland.ORCID 0000-0001-6662-0518
Kari SalokasInstitute of Biotechnology, University of Helsinki, 00014, Helsinki, Finland.ORCID 0000-0002-4471-6698
Wilhelmiina NiininenCancer Signaling, Faculty of Medicine and Health Technology, Tampere University, 33014, Tampere, Finland.
Laura KalevaCancer Signaling, Faculty of Medicine and Health Technology, Tampere University, 33014, Tampere, Finland.
Kaiyang ZhangResearch Program in Systems Oncology, Research Program Unit, Faculty of Medicine, University of Helsinki, 00014, Helsinki, Finland.
Mariliina ArjamaInstitute for Molecular Medicine, FIMM, Helsinki Institute of Life Science (HiLIFE), University of Helsinki, 00014, Helsinki, Finland.
Greta GudoityteScience for Life Laboratory, Department of Oncology and Pathology, Karolinska Institutet, 17121, Stockholm, Sweden.
Brinton Seashore-LudlowScience for Life Laboratory, Department of Oncology and Pathology, Karolinska Institutet, 17121, Stockholm, Sweden.
Markku VarjosaloInstitute of Biotechnology, University of Helsinki, 00014, Helsinki, Finland.
Olli KallioniemiInstitute for Molecular Medicine, FIMM, Helsinki Institute of Life Science (HiLIFE), University of Helsinki, 00014, Helsinki, Finland.ORCID 0000-0002-3231-0332
Sampsa HautaniemiResearch Program in Systems Oncology, Research Program Unit, Faculty of Medicine, University of Helsinki, 00014, Helsinki, Finland.
Astrid MurumägiInstitute for Molecular Medicine, FIMM, Helsinki Institute of Life Science (HiLIFE), University of Helsinki, 00014, Helsinki, Finland.
Daniela UngureanuApplied Tumor Genomics, Research Program Unit, Faculty of Medicine, University of Helsinki, 00014, Helsinki, Finland. daniela.ungureanu@helsinki.fi.ORCID 0000-0002-9314-4972
University of Helsinki · FITampere University · FIScience for Life Laboratory · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most patients with ovarian cancer (OC) are diagnosed at a late stage when there are very few therapeutic options and a poor prognosis. This is due to the lack of clearly defined underlying mechanisms or an oncogenic addiction that can be targeted pharmacologically, unlike other types of cancer. Here, we identified protein tyrosine kinase 7 (PTK7) as a potential new therapeutic target in OC following a multiomics approach using genetic and pharmacological interventions. We performed proteomics analyses upon PTK7 knockdown in OC cells and identified novel downstream effectors such as synuclein-γ (SNCG), SALL2, and PP1γ, and these findings were corroborated in ex vivo primary samples using PTK7 monoclonal antibody cofetuzumab. Our phosphoproteomics analyses demonstrated that PTK7 modulates cell adhesion and Rho-GTPase signaling to sustain epithelial-mesenchymal transition (EMT) and cell plasticity, which was confirmed by high-content image analysis of 3D models. Furthermore, using high-throughput drug sensitivity testing (525 drugs) we show that targeting PTK7 exhibited synergistic activity with chemotherapeutic agent paclitaxel, CHK1/2 inhibitor prexasertib, and PLK1 inhibitor GSK461364, among others, in OC cells and ex vivo primary samples. Taken together, our study provides unique insight into the function of PTK7, which helps to define its role in mediating aberrant Wnt signaling in ovarian cancer.

Indexed as

Ovarian NeoplasmsReceptor Protein-Tyrosine KinasesCarcinoma, Ovarian EpithelialCell Adhesion MoleculesCell Line, TumorCell PlasticityEpithelial-Mesenchymal TransitionFemaleHumansWnt Signaling PathwayCell Adhesion MoleculesPTK7 protein, humanReceptor Protein-Tyrosine Kinases

Identifiers

PMID35977930
PMCPMC9386025
OpenAlexW4292162624

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.