Evidence map›Paper›PMID 35976093›Full record

ArticleeLife2022

PI3K signaling specifies proximal-distal fate by driving a developmental gene regulatory network in SOX9+ mouse lung progenitors.

Divya Khattar, Sharlene Fernandes, John Snowball, Minzhe Guo, Matthew C Gillen, Suchi Singh Jain, Debora Sinner, William Zacharias, Daniel T Swarr

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Divya Khattar *Department of Pediatrics, University of Cincinnati, Cincinnati, United States.
Sharlene Fernandes *Perinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, United States.
John SnowballPerinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, United States.
Minzhe GuoPerinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, United States.
Matthew C GillenDepartment of Pediatrics, University of Cincinnati, Cincinnati, United States.
Suchi Singh JainPerinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, United States.
Debora SinnerPerinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, United States.ORCID 0000-0002-0704-5223
William ZachariasPerinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, United States.ORCID 0000-0002-2643-0610
Daniel T SwarrDepartment of Pediatrics, University of Cincinnati, Cincinnati, United States.ORCID 0000-0002-7305-0442
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati · US

Funding

Prdm3/16 Regulate Chromatin Accessibility to Determine Alveolar MaturationR01HL164414 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI WHITSETT, JEFFREY A · 2022 to 2025
$2.8M
Molecular mechanisms underlying trachea formation and the pathology of tracheomalacia and complete tracheal ringsR01HL144774 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI SINNER, DEBORA · 2019 to 2023
$2.2M
Epigenetic Regulation of the Maturation and Function of Lung Epithelium by the SWI/SNF Proteins ARID1A and ARID1B.R01HL156860 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI SINNER, DEBORA, ZACHARIAS, WILLIAM JOHN · 2021 to 2025
$1.9M
Mechanistic evaluation of a novel Wnt-responsive adult alveolar epithelial progenitor population during regeneration after diffuse alveolar damageK08HL140178 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI ZACHARIAS, WILLIAM JOHN · 2018 to 2022
$815k
The role of the long non-coding RNA Falcor in early endoderm and lung developmentK08HL130666 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI SWARR, DANIEL, T (MD) TODD · 2016 to 2020
$807k
NHLBI NIH HHS K08 HL130666NHLBI NIH HHS K08 HL140178NHLBI NIH HHS R01 HL144774NHLBI NIH HHS R01 HL156860NHLBI NIH HHS R01 HL164414
6 · The paper itself

Abstract

The tips of the developing respiratory buds are home to important progenitor cells marked by the expression of SOX9 and ID2. Early in embryonic development (prior to E13.5), SOX9+progenitors are multipotent, generating both airway and alveolar epithelium, but are selective progenitors of alveolar epithelial cells later in development. Transcription factors, including

Indexed as

Gene Regulatory NetworksPhosphatidylinositol 3-KinasesAnimalsCell DifferentiationChromatinFemaleGene Expression Regulation, DevelopmentalLungMicePhosphatidylinositol 3-KinasePregnancyChromatinPhosphatidylinositol 3-KinasePhosphatidylinositol 3-KinasesATAC-Seqchromatin accessibilitydevelopmental biologyepigenomicsgeneticsgenomicslung developmentlung distal tip progenitor cellsmouse

Identifiers

PMID35976093
PMCPMC9427112
OpenAlexW4292166122

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.