Evidence map›Paper›PMID 35974914›Full record

ArticleIndian journal of microbiology2022

Nematicidal Property of Clindamycin and 5-hydroxy-2-methyl Furfural (HMF) from the Banana Endophyte

R Saravanan, N Saranya, V Ragapriya, V Rajaswaminathan, M Kavino, A S Krishnamoorthy, S Nakkeeran

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PubMed Full text at PMC Publisher
In one paragraph

Article in Indian journal of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 15 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

R SaravananDepartment of Plant Pathology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu India.
N SaranyaDepartment of Plant Molecular Biology and Bioinformatics, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu India.
V RagapriyaDepartment of Plant Molecular Biology and Bioinformatics, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu India.
V RajaswaminathanDepartment of Plant Pathology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu India.
M KavinoDepartment of Fruit Science, Horticultural College and Research Institute, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu India.
A S KrishnamoorthyDepartment of Plant Pathology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu India.
S NakkeeranDepartment of Plant Pathology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu India.ORCID 0000-0001-9222-4594
Tamil Nadu Agricultural University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Radopholus similis is a burrowing nematode which causes banana toppling disease and is of major economic threat for the banana production. Bacterial endophyte Bacillus velezensis (YEBBR6) produce biomolecules like 5-hydroxy-2-methyl furfural (HMF) and clindamycin in during interaction with Fusarium oxysporum f.sp. cubense. Molecular modelling and docking studies were performed on Radopholus similis protein targets such as calreticulin, cathepsin S-like cysteine proteinase, β-1,4 -endoglucanase, reticulocalbin, venom allergen-like protein and serine carboxypeptidase to understand the mode of action of HMF and clindamycin against Radopholus similis. Structurally validated protein targets of Graphical Abstract: Supplementary Information: The online version contains supplementary material available at 10.1007/s12088-022-01011-2.

Indexed as

Bacillus velezensisBacterial endophyteCalreticulinCathepsin S-like cysteine proteinaseNematicidal biomoleculeReticulocalbinSerine carboxypeptidaseVenom allergen-like proteins and molecular modelling

Identifiers

PMID35974914
PMCPMC9375788
OpenAlexW4220832668

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.