Evidence map›Paper›PMID 35972711›Full record

ArticleJournal of fluorescence2022

A Novel Fluorescent Probe for the Detection of Cyanide Ions in Solutions and Studies on Its Biophysical Interactions with ctDNA and Proteases.

Bensu Doyuran, Elmas Gökoğlu, Ayman Zouitini, Ergin Keleş, Tugba Taskin-Tok, Nurgül Seferoğlu, Zeynel Seferoğlu

Abstract read
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In one paragraph

Article in Journal of fluorescence, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Photophysical and thermodynamic landscape of interaction of a styryl-based dye with DNA duplex: effect of medium ionic strength and live cell imaging.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Bensu DoyuranDepartment of Chemistry, Hacettepe University, 06800, Ankara, Turkey.
Elmas GökoğluDepartment of Chemistry, Hacettepe University, 06800, Ankara, Turkey. gokoglu@hacettepe.edu.tr.
Ayman ZouitiniDepartment of Chemistry, Gazi University, 06560, Ankara, Turkey.
Ergin KeleşDepartment of Chemistry, Gazi University, 06560, Ankara, Turkey.
Tugba Taskin-TokDepartment of Chemistry, Gaziantep University, 27310, Gaziantep, Turkey.
Nurgül SeferoğluTechnological Dyes and Materials Application and Research Center (TEBAM), Gazi University, 06560, Ankara, Turkey.
Zeynel SeferoğluDepartment of Chemistry, Gazi University, 06560, Ankara, Turkey.
Gazi University · TRHacettepe University · TRGaziantep University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A new cationic indolium based styryl dye (Ci) as a fluorescent probe was synthesized and its anions selectivity/sensitivity properties/molecular interactions with protease enzymes (pepsin/trypsin) and ctDNA has been studied by spectroscopic and computational methods. The fluorescence measurements at different temperatures indicated that quenching mechanism of enzymes by Ci was static. ΔH and ΔS data pointed out electrostatic/hydrophobic interactions with pepsin, and also hydrogen bonds/van der Waals forces with trypsin of Ci. According to Förster's non-radiative energy transfer, binding distances (r) were calculated as 3.53/3.27 nm for pepsin/trypsin. It was also investigated that groove binding is effective in interaction with ctDNA. The results were supported with molecular docking analyzes which have same tendency. Ci has been demonstrated hypsochromic effect with a decrease in polarity of solvents and it showed highly selective colorimetric and fluorometric sensing behavior for cyanide in organic solvent and in aqueous solution.

Indexed as

CyanidesFluorescent DyesDimethyl SulfoxideMolecular Docking SimulationPepsin APeptide HydrolasesSolventsSpectrometry, FluorescenceThermodynamicsTrypsinCyanidesDimethyl SulfoxideFluorescent DyesPepsin APeptide HydrolasesSolventsTrypsinCyanideFRETPepsinStyrylindolium dyeTrypsin

Identifiers

PMID35972711
OpenAlexW4291824649

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.