Evidence map›Paper›PMID 35972146›Full record

ArticlemBio2022

Direct Capsid Labeling of Infectious HIV-1 by Genetic Code Expansion Allows Detection of Largely Complete Nuclear Capsids and Suggests Nuclear Entry of HIV-1 Complexes via Common Routes.

Sandra Schifferdecker, Vojtech Zila, Thorsten G Müller, Volkan Sakin, Maria Anders-Össwein, Vibor Laketa, Hans-Georg Kräusslich, Barbara Müller

Open access · goldAbstract read
In one paragraph

Article in mBio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Mechanism of HIV-1 Capsid Rupture and Uncoating by Reverse Transcription.bioRxiv : the preprint server for biology · 2026
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  12. Lenacapavir disrupts HIV-1 core integrity while stabilizing the capsid lattice.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sandra SchifferdeckerDepartment of Infectious Diseases, Virology, University Hospital Heidelberggrid.5253.1, Heidelberg, Germany.
Vojtech ZilaDepartment of Infectious Diseases, Virology, University Hospital Heidelberggrid.5253.1, Heidelberg, Germany.
Thorsten G MüllerDepartment of Infectious Diseases, Virology, University Hospital Heidelberggrid.5253.1, Heidelberg, Germany.
Volkan SakinDepartment of Infectious Diseases, Virology, University Hospital Heidelberggrid.5253.1, Heidelberg, Germany.
Maria Anders-ÖssweinDepartment of Infectious Diseases, Virology, University Hospital Heidelberggrid.5253.1, Heidelberg, Germany.
Vibor LaketaDepartment of Infectious Diseases, Virology, University Hospital Heidelberggrid.5253.1, Heidelberg, Germany.
Hans-Georg KräusslichDepartment of Infectious Diseases, Virology, University Hospital Heidelberggrid.5253.1, Heidelberg, Germany.
Barbara MüllerDepartment of Infectious Diseases, Virology, University Hospital Heidelberggrid.5253.1, Heidelberg, Germany.
University Hospital Heidelberg · DEHeidelberg University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cone-shaped mature HIV-1 capsid is the main orchestrator of early viral replication. After cytosolic entry, it transports the viral replication complex along microtubules toward the nucleus. While it was initially believed that the reverse transcribed genome is released from the capsid in the cytosol, recent observations indicate that a high amount of capsid protein (CA) remains associated with subviral complexes during import through the nuclear pore complex (NPC). Observation of postentry events via microscopic detection of HIV-1 CA is challenging, since epitope shielding limits immunodetection and the genetic fragility of CA hampers direct labeling approaches. Here, we present a minimally invasive strategy based on genetic code expansion and click chemistry that allows for site-directed fluorescent labeling of HIV-1 CA, while retaining virus morphology and infectivity. Thereby, we could directly visualize virions and subviral complexes using advanced microscopy, including nanoscopy and correlative imaging. Quantification of signal intensities of subviral complexes revealed an amount of CA associated with nuclear complexes in HeLa-derived cells and primary T cells consistent with a complete capsid and showed that treatment with the small molecule inhibitor PF74 did not result in capsid dissociation from nuclear complexes. Cone-shaped objects detected in the nucleus by electron tomography were clearly identified as capsid-derived structures by correlative microscopy. High-resolution imaging revealed dose-dependent clustering of nuclear capsids, suggesting that incoming particles may follow common entry routes.

Indexed as

HIV-1HIV SeropositivityCapsidCapsid ProteinsCell NucleusEpitopesGenetic CodeHumansVirus ReplicationCapsid ProteinsEpitopesamber suppressioncapsidclick labelingcorrelative microscopyelectron microscopygenetic code expansionHIV-1human immunodeficiency virusprimary CD4+ T cellsSTEDsuperresolution microscopy

Identifiers

PMID35972146
PMCPMC9600849
OpenAlexW4292061869

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.