Evidence map›Paper›PMID 35972145›Full record

ArticlemBio2022

Evidence for a Widespread Third System for Bacterial Polysaccharide Export across the Outer Membrane Comprising a Composite OPX/β-Barrel Translocon.

Johannes Schwabe, María Pérez-Burgos, Marco Herfurth, Timo Glatter, Lotte Søgaard-Andersen

Open access · goldAbstract read
In one paragraph

Article in mBio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Milestones in the development ofJournal of bacteriology · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. An exopolysaccharide pathway from a freshwaterJournal of bacteriology · 2024
    Article
  11. Article
  12. Article
  13. Genetic Loci of Plant PathogenicInternational journal of molecular sciences · 2024
    Article
  14. Article
  15. A novel exopolysaccharide pathway from a freshwaterbioRxiv : the preprint server for biology · 2023
    Article
  16. Review
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Johannes SchwabeDepartment of Ecophysiology, Max Planck Institute for Terrestrial Microbiologygrid.419554.8, Marburg, Germany.
María Pérez-BurgosDepartment of Ecophysiology, Max Planck Institute for Terrestrial Microbiologygrid.419554.8, Marburg, Germany.
Marco HerfurthDepartment of Ecophysiology, Max Planck Institute for Terrestrial Microbiologygrid.419554.8, Marburg, Germany.
Timo GlatterCore Facility for Mass Spectrometry & Proteomics, Max Planck Institute for Terrestrial Microbiologygrid.419554.8, Marburg, Germany.
Lotte Søgaard-AndersenDepartment of Ecophysiology, Max Planck Institute for Terrestrial Microbiologygrid.419554.8, Marburg, Germany.ORCID 0000-0002-0674-0013
Max Planck Institute for Terrestrial Microbiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Gram-negative bacteria, secreted polysaccharides have multiple critical functions. In Wzx/Wzy- and ABC transporter-dependent pathways, an outer membrane (OM) polysaccharide export (OPX) type translocon exports the polysaccharide across the OM. The paradigm OPX protein Wza of Escherichia coli is an octamer in which the eight C-terminal domains form an α-helical OM pore and the eight copies of the three N-terminal domains (D1 to D3) form a periplasmic cavity. In synthase-dependent pathways, the OM translocon is a 16- to 18-stranded β-barrel protein. In Myxococcus xanthus, the secreted polysaccharide EPS (exopolysaccharide) is synthesized in a Wzx/Wzy-dependent pathway. Here, using experiments, phylogenomics, and computational structural biology, we identify and characterize EpsX as an OM 18-stranded β-barrel protein important for EPS synthesis and identify AlgE, a β-barrel translocon of a synthase-dependent pathway, as its closest structural homolog. We also find that EpsY, the OPX protein of the EPS pathway, consists only of the periplasmic D1 and D2 domains and completely lacks the domain for spanning the OM (herein termed a

Indexed as

Escherichia coli ProteinsPolysaccharides, BacterialATP-Binding Cassette TransportersBacterial Outer Membrane ProteinsEscherichia coliGram-Negative BacteriaPeriplasmATP-Binding Cassette TransportersBacterial Outer Membrane ProteinsEscherichia coli ProteinsPolysaccharides, Bacterialbeta-barrel proteinscapsular polysaccharideexopolysaccharideexport of polysaccharidesMyxococcus xanthusOM transloconOPX proteinssynthase-dependent pathwayWzx/Wzy pathway

Identifiers

PMID35972145
PMCPMC9601211
OpenAlexW4292185226

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.