Evidence map›Paper›PMID 35971133›Full record

ArticleSkeletal muscle2022

Prolonged FOS activity disrupts a global myogenic transcriptional program by altering 3D chromatin architecture in primary muscle progenitor cells.

A Rasim Barutcu, Gabriel Elizalde, Alfredo E Gonzalez, Kartik Soni, John L Rinn, Amy J Wagers, Albert E Almada

Open access · goldAbstract read
In one paragraph

Article in Skeletal muscle, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

A Rasim BarutcuDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA.
Gabriel ElizaldeDepartment of Orthopaedic Surgery, University of Southern California, Los Angeles, CA, USA.
Alfredo E GonzalezDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA.
Kartik SoniDepartment of Orthopaedic Surgery, University of Southern California, Los Angeles, CA, USA.
John L RinnDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA.
Amy J WagersDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA.
Albert E AlmadaDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA. aealmada@usc.edu.
Harvard University · USUniversity of Southern California · USUniversity of Colorado Boulder · US

Funding

TRAINING IN DIABETES AND METABOLISMT32DK007260 · NIDDK · JOSLIN DIABETES CENTER · PI LAURIE J GOODYEAR · 1986 to 2026
$13.6M
Regulation and Function of Growth Differentiation Factor 11 During Development and AgingR01AG048917 · NIA · HARVARD UNIVERSITY · PI WAGERS, AMY JO · 2016 to 2020
$2.8M
Epigenomic drivers of human muscle progenitor cells in development and diseaseR01ES024935 · NIEHS · HARVARD UNIVERSITY · PI WAGERS, AMY JO · 2014 to 2015
$656k
Regulation and function of Growth Differentiation Factor 11 during development and agingR56AG048917 · NIA · HARVARD UNIVERSITY · PI WAGERS, AMY JO · 2015 to 2015
$338k
NIA NIH HHS R01 AG048917NIA NIH HHS R56 AG048917NIDDK NIH HHS T32 DK007260NIEHS NIH HHS R01 ES024935NIH HHS 5T32DK007260NIH HHS ES024935 and AG048917
6 · The paper itself

Abstract

backgroundThe AP-1 transcription factor, FBJ osteosarcoma oncogene (FOS), is induced in adult muscle satellite cells (SCs) within hours following muscle damage and is required for effective stem cell activation and muscle repair. However, why FOS is rapidly downregulated before SCs enter cell cycle as progenitor cells (i.e., transiently expressed) remains unclear. Further, whether boosting FOS levels in the proliferating progeny of SCs can enhance their myogenic properties needs further evaluation.

methodsWe established an inducible, FOS expression system to evaluate the impact of persistent FOS activity in muscle progenitor cells ex vivo. We performed various assays to measure cellular proliferation and differentiation, as well as uncover changes in RNA levels and three-dimensional (3D) chromatin interactions.

resultsPersistent FOS activity in primary muscle progenitor cells severely antagonizes their ability to differentiate and form myotubes within the first 2 weeks in culture. RNA-seq analysis revealed that ectopic FOS activity in muscle progenitor cells suppressed a global pro-myogenic transcriptional program, while activating a stress-induced, mitogen-activated protein kinase (MAPK) transcriptional signature. Additionally, we observed various FOS-dependent, chromosomal re-organization events in A/B compartments, topologically associated domains (TADs), and genomic loops near FOS-regulated genes.

conclusionsOur results suggest that elevated FOS activity in recently activated muscle progenitor cells perturbs cellular differentiation by altering the 3D chromosome organization near critical pro-myogenic genes. This work highlights the crucial importance of tightly controlling FOS expression in the muscle lineage and suggests that in states of chronic stress or disease, persistent FOS activity in muscle precursor cells may disrupt the muscle-forming process.

Indexed as

Muscle DevelopmentMyoblastsCell DifferentiationChromatinMuscle Fibers, SkeletalStem CellsChromatinAP-1FOSHi-CMuscle progenitor cellsMuscle satellite cellsMyogenic differentiationTopologically associated domains (TADs), gene loops

Identifiers

PMID35971133
PMCPMC9377060
OpenAlexW4291383263

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.