Evidence map›Paper›PMID 35969734›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

De novo designed protein inhibitors of amyloid aggregation and seeding.

Kevin A Murray, Carolyn J Hu, Sarah L Griner, Hope Pan, Jeannette T Bowler, Romany Abskharon, Gregory M Rosenberg, Xinyi Cheng, Paul M Seidler, David S Eisenberg

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
8.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
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  12. Generating the polymorph landscapes of amyloid fibrils using AI: RibbonFold.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Design of amyloidogenic peptide traps.Nature chemical biology · 2024
    Article
  18. Chemical science · 2024
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Kevin A MurrayDepartment of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095-1569.ORCID 0000-0003-1969-7701
Carolyn J HuDepartment of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095-1569.
Sarah L GrinerDepartment of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095-1569.
Hope PanDepartment of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095-1569.
Jeannette T BowlerDepartment of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095-1569.
Romany AbskharonDepartment of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095-1569.
Gregory M RosenbergDepartment of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095-1569.
Xinyi ChengDepartment of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095-1569.
Paul M SeidlerDepartment of Pharmacology and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA 90089-9121.
David S EisenbergDepartment of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095-1569.ORCID 0000-0003-2432-5419
University of California, Los Angeles · USUniversity of Southern California · US

Funding

UCLA-Caltech Medical Scientist Training ProgramT32GM008042 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI AJIJOLA, OLUJIMI A, DAWSON, DAVID WAYNE · 1985 to 2023
$29.9M
CHEMISTRY BIOLOGY INTERFACE TRAINING PROGRAMT32GM008496 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MAYNARD, HEATHER D · 1993 to 2019
$6.3M
Towards Treatment of Alzheimer’s Disease by Targeting Pathogenic Tau and Beta-Amyloid StructuresR01AG070895 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DAVID EISENBERG · 2022 to 2026
$5.8M
Structure and Inhibition of Amyloid in Alzheimer's DiseaseRF1AG054022 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI EISENBERG, DAVID · 2016 to 2018
$4.2M
Development of inhibitors and diagnostics for amyloid diseasesRF1AG048120 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI EISENBERG, DAVID · 2019 to 2019
$1.9M
NIA NIH HHS R01 AG070895NIA NIH HHS RF1 AG048120NIA NIH HHS RF1 AG054022NIGMS NIH HHS T32 GM008042NIGMS NIH HHS T32 GM008496
6 · The paper itself

Abstract

Neurodegenerative diseases are characterized by the pathologic accumulation of aggregated proteins. Known as amyloid, these fibrillar aggregates include proteins such as tau and amyloid-β (Aβ) in Alzheimer's disease (AD) and alpha-synuclein (αSyn) in Parkinson's disease (PD). The development and spread of amyloid fibrils within the brain correlates with disease onset and progression, and inhibiting amyloid formation is a possible route toward therapeutic development. Recent advances have enabled the determination of amyloid fibril structures to atomic-level resolution, improving the possibility of structure-based inhibitor design. In this work, we use these amyloid structures to design inhibitors that bind to the ends of fibrils, "capping" them so as to prevent further growth. Using de novo protein design, we develop a library of miniprotein inhibitors of 35 to 48 residues that target the amyloid structures of tau, Aβ, and αSyn. Biophysical characterization of top in silico designed inhibitors shows they form stable folds, have no sequence similarity to naturally occurring proteins, and specifically prevent the aggregation of their targeted amyloid-prone proteins in vitro. The inhibitors also prevent the seeded aggregation and toxicity of fibrils in cells. In vivo evaluation reveals their ability to reduce aggregation and rescue motor deficits in

Indexed as

alpha-SynucleinAlzheimer DiseaseAmyloidAmyloid beta-PeptidesAmyloidosisHumansParkinson DiseaseProtein Aggregation, Pathologicaltau Proteinsalpha-SynucleinAmyloidAmyloid beta-Peptidestau Proteinsalpha-synucleinamyloidamyloid-betaprotein designtau

Identifiers

PMID35969734
PMCPMC9407671
OpenAlexW4291652118

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.