Evidence map›Paper›PMID 35969549›Full record

ArticleIEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society2022

Constrained CPD of Complex-Valued Multi-Subject fMRI Data via Alternating Rank-R and Rank-1 Least Squares.

Li-Dan Kuang, Qiu-Hua Lin, Xiao-Feng Gong, Jianming Zhang, Wenjun Li, Feng Li, Vince D Calhoun

Open access · diamondAbstract read
In one paragraph

Article in IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Li-Dan Kuang
Qiu-Hua Lin
Xiao-Feng Gong
Jianming Zhang
Wenjun Li
Feng Li
Vince D Calhoun
Changsha University of Science and Technology · CNDalian University of Technology · CNGeorgia Institute of Technology · US

Funding

Trans-omics Integration of Multi-omics Studies for OsteoporosisU19AG055373 · NIA · TULANE UNIVERSITY OF LOUISIANA · PI HONG-WEN DENG · 2017 to 2026
$24.3M
Transcranial Direct Current Stimulation for Treatment of Auditory Verbal HalluciP20GM103472 · NIGMS · THE MIND RESEARCH NETWORK · PI BEDRICK, EDWARD J · 2012 to 2017
$14.3M
Informed Data-Driven Fusion of Behavior, Brain Function, and GenesR01EB005846 · NIBIB · THE MIND RESEARCH NETWORK · PI CALHOUN, VINCE D · 2005 to 2016
$5.5M
Integration of brain imaging with genomic and epigenomic dataR01MH104680 · NIMH · TULANE UNIVERSITY OF LOUISIANA · PI CALHOUN, VINCE D, DENG, HONG-WEN · 2014 to 2017
$2.1M
Integration of fMRI imaging, genomics, network and biological knowledgeR01MH107354 · NIMH · TULANE UNIVERSITY OF LOUISIANA · PI WANG, YU-PING · 2015 to 2018
$1.9M
Environmental Health Perspectives, NIEHS27302C0031 · NIEHS · 2008 to 2008
$1.2M
NIA NIH HHS U19 AG055373NIBIB NIH HHS R01 EB005846NIEHS NIH HHS 27302C0031NIGMS NIH HHS P20 GM103472NIMH NIH HHS R01 MH104680NIMH NIH HHS R01 MH107354
6 · The paper itself

Abstract

Complex-valued shift-invariant canonical polyadic decomposition (CPD) under a spatial phase sparsity constraint (pcsCPD) shows excellent separation performance when applied to band-pass filtered complex-valued multi-subject fMRI data. However, some useful information may also be eliminated when using a band-pass filter to suppress unwanted noise. As such, we propose an alternating rank- R and rank-1 least squares optimization to relax the CPD model. Based upon this optimization method, we present a novel constrained CPD algorithm with temporal shift-invariance and spatial sparsity and orthonormality constraints. More specifically, four steps are conducted until convergence for each iteration of the proposed algorithm: 1) use rank- R least-squares fit under spatial phase sparsity constraint to update shared spatial maps after phase de-ambiguity; 2) use orthonormality constraint to minimize the cross-talk between shared spatial maps; 3) update the aggregating mixing matrix using rank- R least-squares fit; 4) utilize shift-invariant rank-1 least-squares on a series of rank-1 matrices reconstructed by each column of the aggregating mixing matrix to update shared time courses, and subject-specific time delays and intensities. The experimental results of simulated and actual complex-valued fMRI data show that the proposed algorithm improves the estimates for task-related sensorimotor and auditory networks, compared to pcsCPD and tensorial spatial ICA. The proposed alternating rank- R and rank-1 least squares optimization is also flexible to improve CPD-related algorithm using alternating least squares.

Indexed as

BrainMagnetic Resonance ImagingAlgorithmsHumansLeast-Squares Analysis

Identifiers

PMID35969549
PMCPMC9613874
OpenAlexW4291910547

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.