Evidence map›Paper›PMID 35968834›Full record

ArticleAnalytical methods : advancing methods and applications2022

Machine learning and signal processing assisted differential mobility spectrometry (DMS) data analysis for chemical identification.

Pranay Chakraborty, Maneeshin Y Rajapakse, Mitchell M McCartney, Nicholas J Kenyon, Cristina E Davis

Open access · greenAbstract read
In one paragraph

Article in Analytical methods : advancing methods and applications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Pranay ChakrabortyDepartment of Mechanical and Aerospace Engineering, University of California Davis, Davis, CA, USA. cedavis@ucdavis.edu.ORCID 0000-0002-1307-1751
Maneeshin Y RajapakseDepartment of Mechanical and Aerospace Engineering, University of California Davis, Davis, CA, USA. cedavis@ucdavis.edu.
Mitchell M McCartneyDepartment of Mechanical and Aerospace Engineering, University of California Davis, Davis, CA, USA. cedavis@ucdavis.edu.ORCID 0000-0001-7236-8400
Nicholas J KenyonUC Davis Lung Center, One Shields Avenue, Davis, CA, USA.
Cristina E DavisDepartment of Mechanical and Aerospace Engineering, University of California Davis, Davis, CA, USA. cedavis@ucdavis.edu.ORCID 0000-0002-9878-7758
VA Northern California Health Care System · USUniversity of California, Davis · US

Funding

UC Davis Clinical and Translational Science CenterUL1TR001860 · NCATS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI KENYON, NICHOLAS J., LYLES, COURTNEY REES · 2016 to 2025
$47.3M
UC Davis Environmental Health Sciences Core CenterP30ES023513 · NIEHS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Irva Hertz-Picciotto · 2015 to 2026
$26.0M
Revisiting ReCHARGE: ECHO Follow up on Middle Childhood and AdolescenceUG3OD023365 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BENNETT, DEBORAH HALL, HERTZ-PICCIOTTO, IRVA · 2016 to 2024
$6.4M
Monitoring of disease-induced skin VOC patterns from handheld and wearable chemical sensorsU01TR004083 · NCATS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CRISTINA ELIZABETH DAVIS, Nicholas J. KENYON · 2022 to 2026
$5.9M
Portable GC detector for breath-based COVID diagnosticsU18TR003795 · NCATS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI DAVIS, CRISTINA ELIZABETH, KENYON, NICHOLAS J. · 2021 to 2022
$1.9M
Defining Breath VOC Biomarkers to Improve Respiratory Health of Exposed VeteransI01BX004965 · VA · VA NORTHERN CALIFORNIA HEALTH CARE SYS · PI HARPER, RICHART W, KENYON, NICHOLAS J. · 2021 to 2025
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BLRD VA I01 BX004965NCATS NIH HHS U01 TR004083NCATS NIH HHS U18 TR003795NCATS NIH HHS UL1 TR001860NIEHS NIH HHS P30 ES023513NIH HHS UG3 OD023365
6 · The paper itself

Abstract

Differential mobility spectrometry (DMS)-based detectors are being widely studied to detect chemical warfare agents, explosives, chemicals, drugs and analyze volatile organic compounds (VOCs). The dispersion plots from DMS devices are complex to effectively analyze through visual inspection. In the current work, we adopted machine learning to differentiate pure chemicals and identify chemicals in a mixture. In particular, we observed the convolutional neural network algorithm exhibits excellent accuracy in differentiating chemicals in their pure forms while also identifying chemicals in a mixture. In addition, we propose and validate the magnitude-squared coherence (msc) between the DMS data of known chemical composition and that of an unknown sample can be sufficient to inspect the chemical composition of the unknown sample. We have shown that the msc-based chemical identification requires the least amount of experimental data as opposed to the machine learning approach.

Indexed as

Data AnalysisVolatile Organic CompoundsIon Mobility SpectrometryMachine LearningSpectrum AnalysisVolatile Organic Compounds

Identifiers

PMID35968834
PMCPMC9479699
OpenAlexW4291538828

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.