Evidence map›Paper›PMID 35967429›Full record

ArticleFrontiers in immunology2022

Investigation of the causal etiology in a patient with T-B+NK+ immunodeficiency.

Robert Sertori, Jian-Xin Lin, Esteban Martinez, Sadhna Rana, Andrew Sharo, Majid Kazemian, Uma Sunderam, Mark Andrake, Susan Shinton, Billy Truong and 8 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Loss ofGenes & diseases · 2026
    Article
  2. Immune-Enhancing Effects ofCurrent issues in molecular biology · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 2 countries.

Robert SertoriBlood Cell Development and Function Program, Fox Chase Cancer Center, Philadelphia, PA, United States.
Jian-Xin LinLaboratory of Molecular Immunology, Immunology Center, National Heart, Lung, and Blood Institute, National Institutes of Health (NIH), Bethesda, MD, United States.
Esteban MartinezBlood Cell Development and Function Program, Fox Chase Cancer Center, Philadelphia, PA, United States.
Sadhna RanaInnovation Labs, Tata Consultancy Services, Hyderabad, India.
Andrew SharoCenter for Computational Biology, University of California, Berkeley, CA, United States.
Majid KazemianDepartments of Biochemistry and Computer Science, Purdue University, West Lafayette, IN, United States.
Uma SunderamInnovation Labs, Tata Consultancy Services, Hyderabad, India.
Mark AndrakeMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, PA, United States.
Susan ShintonBlood Cell Development and Function Program, Fox Chase Cancer Center, Philadelphia, PA, United States.
Billy TruongBlood Cell Development and Function Program, Fox Chase Cancer Center, Philadelphia, PA, United States.
Roland M DunbrackMolecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, PA, United States.
Chengyu LiuTransgenic Core, National Heart, Lung, and Blood Institute, National Institutes of Health (NIH), Bethesda, MD, United States.
Rajgopol SrinivasanInnovation Labs, Tata Consultancy Services, Hyderabad, India.
Steven E BrennerCenter for Computational Biology, University of California, Berkeley, CA, United States.
Christine M SeroogyDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, United States.
Jennifer M PuckDepartment of Pediatrics, University of California San Francisco and UCSF Benioff Children's Hospital, San Francisco, CA, United States.
Warren J LeonardLaboratory of Molecular Immunology, Immunology Center, National Heart, Lung, and Blood Institute, National Institutes of Health (NIH), Bethesda, MD, United States.
David L WiestBlood Cell Development and Function Program, Fox Chase Cancer Center, Philadelphia, PA, United States.
Fox Chase Cancer Center · USTata Consultancy Services (India) · INNational Institutes of Health · USUniversity of California, Berkeley · USNational Heart Lung and Blood Institute · USPurdue University West Lafayette · USUniversity of California, San Francisco · USUniversity of Wisconsin–Madison · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
IL-2 Family Cytokines and their Receptors-- Biology of the IL-2 systemZIAHL005401 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI LEONARD, WARREN J · 2009 to 2025
$22.5M
Inherited T cell defects: Diagnosis, Mechanisms and TreatmentsP01AI138962 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BRENNER, STEVEN E · 2020 to 2024
$11.3M
MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008295 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI HURLEY, JAMES H, WEMMER, DAVID E · 1989 to 2022
$8.1M
Structural Bioinformatics of Proteins and Protein Complexes and Applications to Cancer BiologyR35GM122517 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI ROLAND L DUNBRACK · 2017 to 2026
$6.3M
Joint submission for administrative supplement proposal: HIPAA aligned storage and computing solutionR35GM138283 · NIGMS · PURDUE UNIVERSITY · PI KAZEMIAN, MAJID · 2020 to 2024
$2.0M
Expression, regulation, and role of enhancer RNAs in T helper cellsK22HL125593 · NHLBI · PURDUE UNIVERSITY · PI KAZEMIAN, MAJID · 2017 to 2019
$747k
NCI NIH HHS P30 CA006927NHLBI NIH HHS K22 HL125593NIAID NIH HHS P01 AI138962NIGMS NIH HHS R35 GM122517NIGMS NIH HHS R35 GM138283NIGMS NIH HHS T32 GM008295
6 · The paper itself

Abstract

Newborn screening for severe combined immunodeficiency (SCID) has not only accelerated diagnosis and improved treatment for affected infants, but also led to identification of novel genes required for human T cell development. A male proband had SCID newborn screening showing very low T cell receptor excision circles (TRECs), a biomarker for thymic output of nascent T cells. He had persistent profound T lymphopenia, but normal numbers of B and natural killer (NK) cells. Despite an allogeneic hematopoietic stem cell transplant from his brother, he failed to develop normal T cells. Targeted resequencing excluded known SCID genes; however, whole exome sequencing (WES) of the proband and parents revealed a maternally inherited X-linked missense mutation in

Indexed as

LymphopeniaSevere Combined ImmunodeficiencyAnimalsHumansInfantInfant, NewbornMaleMiceNeonatal ScreeningT-LymphocytesZebrafishimmunodeficiencyMED14newborn screeningsevere combined immunodeficiency (SCID)T cell lymphopeniathymuszebrafish

Identifiers

PMID35967429
PMCPMC9372720
OpenAlexW4288535802

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.