ArticleThe Plant cell2022
The final piece of the Triangle of U: Evolution of the tetraploid Brassica carinata genome.
Article in The Plant cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.
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Who cites it
37 citing papers in PubMed, 56 citations in OpenAlex.
- Genome-wide cyclin gene evolution in Arabidopsis and Brassica reveals polyploidization-driven duplication and flowering-time associations.Molecular genetics and genomics : MGG · 2026Article
- Expanding the triangle of U: comparative analysis of the Hirschfeldia incana genome provides insights into chromosomal evolution, phylogenomics and high photosynthesis-related traits.Annals of botany · 2026Article
- Transposable elements and their epigenetic modifications mediate gene expression and subgenome dominance in Brassica carinata.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Origin and Evolution of Ammonium Transporters (AMTs) in Plants and Systematic Expression Studies inPlants (Basel, Switzerland) · 2026Article
- Causes and consequences of cytonuclear incompatibility in hybrids of flowering plants.Journal of experimental botany · 2026Review
- Genome-wide identification of NRAMP gene family in Brassica U's triangle species and its response to Cadmium stress in B. napus.BMC plant biology · 2026Article
- Genome-Wide Identification and Evolutionary Analysis of Sucrose Synthase (Plants (Basel, Switzerland) · 2026Article
- quota_Anchor: a strand and whole genome duplication-aware collinear gene identification tool.aBIOTECH · 2026Article
- Heterologous expression of the Di19 gene from the B subgenome in Brassica napus enhances plant resistance to multiple abiotic and biotic stressors.Plant communications · 2026Article
- Comprehensive analysis of GGCT genes in u's triangle Brassica species: insights into abiotic stress responses and potential association of BnaGGCT11/26 with seed weight.BMC plant biology · 2025Article
- WRKYs as regulatory hubs of secondary metabolic networks: Diverse inducers and distinct responses.Plant communications · 2025Review
- Genome-wide identification and evolutionary analysis of disease resistance genes in Brassica carinata.The plant genome · 2025Article
- Deciphering octoploid strawberry evolution with serial LTR similarity matrices for subgenome partition.Horticulture research · 2025Article
- Identification and expression analysis of the cysteine synthase (CSase) gene family in Brassica napus L. under abiotic stress.BMC plant biology · 2025Article
- Genetic diversity and population structure in Ethiopian mustard (Brassica carinata A. Braun) revealed by high-density DArTSeq SNP genotyping.BMC genomics · 2025Article
- Genome-Wide Identification Analysis of the 4-Coumarate: Coa Ligase (4CL) Gene Family inPlants (Basel, Switzerland) · 2025Article
- To be or not to be a nonhost species: A case study of the Leptosphaeria maculans and Brassica carinata interaction.Environmental microbiology reports · 2024Article
- Identification of quantitative trait loci and candidate genes for pod shatter resistance in Brassica carinata.BMC plant biology · 2024Article
- Contribution of homoeologous exchange to domestication of polyploid Brassica.Genome biology · 2024Article
- Polyploids of Brassicaceae: Genomic Insights and Assembly Strategies.Plants (Basel, Switzerland) · 2024Review
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Authors and funding
21 authors at 6 institutions in 4 countries.
Funding
Abstract
Ethiopian mustard (Brassica carinata) is an ancient crop with remarkable stress resilience and a desirable seed fatty acid profile for biofuel uses. Brassica carinata is one of six Brassica species that share three major genomes from three diploid species (AA, BB, and CC) that spontaneously hybridized in a pairwise manner to form three allotetraploid species (AABB, AACC, and BBCC). Of the genomes of these species, that of B. carinata is the least understood. Here, we report a chromosome scale 1.31-Gbp genome assembly with 156.9-fold sequencing coverage for B. carinata, completing the reference genomes comprising the classic Triangle of U, a classical theory of the evolutionary relationships among these six species. Our assembly provides insights into the hybridization event that led to the current B. carinata genome and the genomic features that gave rise to the superior agronomic traits of B. carinata. Notably, we identified an expansion of transcription factor networks and agronomically important gene families. Completion of the Triangle of U comparative genomics platform has allowed us to examine the dynamics of polyploid evolution and the role of subgenome dominance in the domestication and continuing agronomic improvement of B. carinata and other Brassica species.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.