Evidence map›Paper›PMID 35960726›Full record

ArticlePloS one2022

A high-throughput integrated biofilm-on-a-chip platform for the investigation of combinatory physicochemical responses to chemical and fluid shear stress.

Ann V Nguyen, Arash Yahyazadeh Shourabi, Mohammad Yaghoobi, Shiying Zhang, Kenneth W Simpson, Alireza Abbaspourrad

Abstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ann V NguyenDepartment of Food Science, College of Agricultural and Life Sciences, Cornell University, Ithaca, New York, United States of America.
Arash Yahyazadeh ShourabiDepartment of Food Science, College of Agricultural and Life Sciences, Cornell University, Ithaca, New York, United States of America.
Mohammad YaghoobiDepartment of Food Science, College of Agricultural and Life Sciences, Cornell University, Ithaca, New York, United States of America.ORCID 0000-0001-6973-6436
Shiying ZhangDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York, United States of America.
Kenneth W SimpsonDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York, United States of America.
Alireza AbbaspourradDepartment of Food Science, College of Agricultural and Life Sciences, Cornell University, Ithaca, New York, United States of America.ORCID 0000-0001-5617-9220

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Physicochemical conditions play a key role in the development of biofilm removal strategies. This study presents an integrated, double-layer, high-throughput microfluidic chip for real-time screening of the combined effect of antibiotic concentration and fluid shear stress (FSS) on biofilms. Biofilms of Escherichia coli LF82 and Pseudomonas aeruginosa were tested against gentamicin and streptomycin to examine the time dependent effects of concentration and FSS on the integrity of the biofilm. A MatLab image analysis method was developed to measure the bacterial surface coverage and total fluorescent intensity of the biofilms before and after each treatment. The chip consists of two layers. The top layer contains the concentration gradient generator (CGG) capable of diluting the input drug linearly into four concentrations. The bottom layer contains four expanding FSS chambers imposing three different FSSs on cultured biofilms. As a result, 12 combinatorial states of concentration and FSS can be investigated on the biofilm simultaneously. Our proof-of-concept study revealed that the reduction of E. coli biofilms was directly dependent upon both antibacterial dose and shear intensity, whereas the P. aeruginosa biofilms were not impacted as significantly. This confirmed that the effectiveness of biofilm removal is dependent on bacterial species and the environment. Our experimental system could be used to investigate the physicochemical responses of other biofilms or to assess the effectiveness of biofilm removal methods.

Indexed as

Escherichia coliLab-On-A-Chip DevicesAntacidsAnti-Bacterial AgentsBiofilmsPenicillinsPseudomonas aeruginosaAntacidsAnti-Bacterial AgentsPenicillins

Identifiers

PMID35960726
PMCPMC9374262

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.