Evidence map›Paper›PMID 35960480›Full record

ArticleTransgenic research2022

The human EF1a promoter does not provide expression of the transgene in mice.

Nariman Battulin, Alexey Korablev, Anastasia Ryzhkova, Alexander Smirnov, Evelyn Kabirova, Anna Khabarova, Timofey Lagunov, Irina Serova, Oleg Serov

Open access · bronzeAbstract read
In one paragraph

Article in Transgenic research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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  10. Building Blocks of Artificial CRISPR-Based Systems beyond Nucleases.International journal of molecular sciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Nariman BattulinLaboratory of Developmental Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090. battulin@gmail.com.ORCID 0000-0003-0611-0203
Alexey KorablevLaboratory of Developmental Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090.
Anastasia RyzhkovaLaboratory of Developmental Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090.
Alexander SmirnovLaboratory of Developmental Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090.
Evelyn KabirovaLaboratory of Developmental Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090.
Anna KhabarovaLaboratory of Developmental Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090.
Timofey LagunovLaboratory of Developmental Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090.
Irina SerovaLaboratory of Developmental Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090.
Oleg SerovLaboratory of Developmental Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090.
Institute of Cytology and Genetics · RUNovosibirsk State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this work, we set out to create mice susceptible to the SARS-CoV-2 coronavirus. To ensure the ubiquitous expression of the human ACE2 gene we used the human EF1a promoter. Using pronuclear microinjection of the transgene construct, we obtained six founders with the insertion of the EF1a-hACE2 transgene, from which four independent mouse lines were established. Unfortunately, only one line had low levels of hACE2 expression in some organs. In addition, we did not detect the hACE2 protein in primary lung fibroblasts from any of the transgenic lines. Bisulfite sequencing analysis revealed that the EF1a promoter was hypermethylated in the genomes of transgenic animals. Extensive analysis of published works about transgenic animals indicated that EF1a transgenic constructs are frequently inactive. Thus, our case cautions against using the EF1a promoter to generate transgenic animals, as it is prone to epigenetic silencing.

Indexed as

Angiotensin-Converting Enzyme 2Mice, TransgenicAnimalsCOVID-19Disease Models, AnimalHumansMicePeptide Elongation Factor 1Promoter Regions, GeneticSARS-CoV-2TransgenesAngiotensin-Converting Enzyme 2Peptide Elongation Factor 1DNA methylationEF1a promoterExpressionPronuclear microinjectionTransgenesis

Identifiers

PMID35960480
PMCPMC9372930
OpenAlexW4290975592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.