Evidence map›Paper›PMID 35958211›Full record

ReviewFrontiers in plant science2022

TGA transcription factors-Structural characteristics as basis for functional variability.

Špela Tomaž, Kristina Gruden, Anna Coll

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 48 citations in OpenAlex.

  1. Expression Profiling and Characterization ofInternational journal of molecular sciences · 2026
    Article
  2. Genus-Wide Pan-Genome Analysis ofPlants (Basel, Switzerland) · 2026
    Article
  3. AHG1-AFP interaction as a regulatory node in the ABA response during seed germination.The Plant journal : for cell and molecular biology · 2026
    Article
  4. Towards an integrated molecular understanding of plant hormones.Journal of integrative plant biology · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Genes · 2025
    Article
  12. Article
  13. Review
  14. Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2025
    Article
  15. Study on the mechanism of exogenous CaClFrontiers in plant science · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2024
    Article
  20. Identifying aPeerJ · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Špela TomažDepartment of Biotechnology and Systems Biology, National Institute of Biology, Ljubljana, Slovenia.
Kristina GrudenDepartment of Biotechnology and Systems Biology, National Institute of Biology, Ljubljana, Slovenia.
Anna CollDepartment of Biotechnology and Systems Biology, National Institute of Biology, Ljubljana, Slovenia.
National Institute of Biology · SIJožef Stefan International Postgraduate School · SI

Funding

ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
NIGMS NIH HHS R01 GM129325
6 · The paper itself

Abstract

TGA transcription factors are essential regulators of various cellular processes, their activity connected to different hormonal pathways, interacting proteins and regulatory elements. Belonging to the basic region leucine zipper (bZIP) family, TGAs operate by binding to their target DNA sequence as dimers through a conserved bZIP domain. Despite sharing the core DNA-binding sequence, the TGA paralogues exert somewhat different DNA-binding preferences. Sequence variability of their N- and C-terminal protein parts indicates their importance in defining TGA functional specificity through interactions with diverse proteins, affecting their DNA-binding properties. In this review, we provide a short and concise summary on plant TGA transcription factors from a structural point of view, including the relation of their structural characteristics to their functional roles in transcription regulation.

Indexed as

DOG1 domainfunctional variabilityintrinsically disordered regionsplant transcription regulationpost-translational modificationsstructural characteristicsTGA transcription factors

Identifiers

PMID35958211
PMCPMC9360754
OpenAlexW4287921423

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.