Evidence map›Paper›PMID 35958029›Full record

ArticleBayesian analysis2021

Centered Partition Processes: Informative Priors for Clustering (with Discussion).

Sally Paganin, Amy H Herring, Andrew F Olshan, David B Dunson, National Birth Defects Prevention Study

Abstract read
In one paragraph

Article in Bayesian analysis, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Bayesian Clustering via Fusing of Localized Densities.Journal of the American Statistical Association · 2025
    Article
  3. Article
  4. Spectral Clustering, Bayesian Spanning Forest, and Forest Process.Journal of the American Statistical Association · 2024
    Article
  5. Bayesian cluster analysis.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2023
    Review
  6. Dimension-Grouped Mixed Membership Models for Multivariate Categorical Data.Journal of machine learning research : JMLR · 2023
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sally PaganinDepartment of Environmental Science, Policy, and Management, University of California, Berkeley.
Amy H HerringDepartment of Statistical Science, Duke University, Durham.
Andrew F OlshanDepartment of Epidemiology, The University of North Carolina at Chapel Hill, Chapel Hill.
David B DunsonDepartment of Statistical Science, Duke University, Durham.
National Birth Defects Prevention Study

Funding

Reproducibility and Robustness of Dimensionality ReductionR01ES027498 · NIEHS · DUKE UNIVERSITY · PI HERRING, AMY H · 2017 to 2021
$2.9M
NCBDD CDC HHS U01 DD001231NIEHS NIH HHS R01 ES027498
6 · The paper itself

Abstract

There is a very rich literature proposing Bayesian approaches for clustering starting with a prior probability distribution on partitions. Most approaches assume exchangeability, leading to simple representations in terms of Exchangeable Partition Probability Functions (EPPF). Gibbs-type priors encompass a broad class of such cases, including Dirichlet and Pitman-Yor processes. Even though there have been some proposals to relax the exchangeability assumption, allowing covariate-dependence and partial exchangeability, limited consideration has been given on how to include concrete prior knowledge on the partition. For example, we are motivated by an epidemiological application, in which we wish to cluster birth defects into groups and we have prior knowledge of an initial clustering provided by experts. As a general approach for including such prior knowledge, we propose a Centered Partition (CP) process that modifies the EPPF to favor partitions close to an initial one. Some properties of the CP prior are described, a general algorithm for posterior computation is developed, and we illustrate the methodology through simulation examples and an application to the motivating epidemiology study of birth defects.

Indexed as

Bayesian clusteringBayesian nonparametricscentered processDirichlet Processexchangeable probability partition functionmixture modelproduct partition model

Identifiers

PMID35958029
PMCPMC9364237

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.