Evidence map›Paper›PMID 35956452›Full record

ArticlePlants (Basel, Switzerland)2022

Transcriptional Comparison of New Hybrid Progenies and Clone-Cultivars of Tea (

Hani Widhianata, Panjisakti Basunanda, Supriyadi Supriyadi, Taryono Taryono

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Application of Multi-Perspectives in Tea Breeding and the Main Directions.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hani WidhianataFaculty of Agriculture, Universitas Gadjah Mada, Jl. Flora, Caturtunggal, Depok, Sleman, Yogyakarta 55281, Indonesia.ORCID 0000-0002-3199-7005
Panjisakti BasunandaFaculty of Agriculture, Universitas Gadjah Mada, Jl. Flora, Caturtunggal, Depok, Sleman, Yogyakarta 55281, Indonesia.
Supriyadi SupriyadiFaculty of Agricultural Technology, Universitas Gadjah Mada, Jl. Flora, Caturtunggal, Depok, Sleman, Yogyakarta 55281, Indonesia.ORCID 0000-0002-0883-9148
Taryono TaryonoAgrotechnology Innovation Center, Universitas Gadjah Mada, Jl. Tanjung Tirto, Kalitirto, Berbah, Sleman, Yogyakarta 55573, Indonesia.
Universitas Gadjah Mada · ID

Funding

Universitas Gadjah Mada 1893/UN1/DITLIT/DIT-LIT/LT/2018
6 · The paper itself

Abstract

Heterosis or hybrid vigor is the improved performance of a desirable quality in hybrid progeny. Hybridization between high-productive Assam type and high-quality Chinese type clone-cultivar is expected to develop elite tea plant progenies with high quality and productivity. Comparative transcriptomics analyses of leaves from the F1 hybrids and their parental clone-cultivars were conducted to explore molecular mechanisms related to catechin content using a high-throughput next-generation RNA-seq strategy and high-performance liquid chromatography (HPLC). The content of EGCG (epigallocatechin gallate) and C (catechin) was higher in 'Kiara-8' × 'Sukoi', 'Tambi-2' × 'Suka Ati', and 'Tambi-2' × 'TRI-2025' than the other hybrid and clone-cultivars. KEGG (Kyoto Encyclopedia of Genes and Genomes) and GO (Gene Ontology) analysis found that most pathways associated with catechins content were enriched. Significant differentially expressed genes (DEGs) mainly associated with phenylpropanoid, flavonoid, drug metabolism-cytochrome P450, and transcription factor (MYB, bHLH, LOB, and C2H2) pathways appeared to be responsible for the high accumulation of secondary metabolites in 'Kiara-8' × 'Sukoi', 'Tambi-2' × 'Suka Ati', and 'Tambi-2' × 'TRI-2025' as were detected in EGCG and catechin content. Several structural genes related to the above pathways have been obtained, which will be used as candidate genes in the screening of breeding materials.

Indexed as

catechinheterosishybridteatranscriptomic

Identifiers

PMID35956452
PMCPMC9370121
OpenAlexW4289204864

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.