Evidence map›Paper›PMID 35955607›Full record

ArticleInternational journal of molecular sciences2022

Unravelling the Adaptation Mechanisms to High Pressure in Proteins.

Antonino Caliò, Cécile Dubois, Stéphane Fontanay, Michael Marek Koza, François Hoh, Christian Roumestand, Philippe Oger, Judith Peters

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Extremophilic microbial metabolism and radioactive waste disposal.Extremophiles : life under extreme conditions · 2023
    Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Antonino CaliòUniversité de Lyon, UCBL, INSA Lyon, CNRS, MAP UMR 5240, 69621 Villeurbanne, France.ORCID 0000-0003-2324-2902
Cécile DuboisCBS, INSERM U1054, CNRS UMR 5048, Université de Montpellier, 34090 Montpellier, France.ORCID 0000-0003-3216-1880
Stéphane FontanayUniversité de Lyon, UCBL, INSA Lyon, CNRS, MAP UMR 5240, 69621 Villeurbanne, France.ORCID 0000-0002-8936-4323
Michael Marek KozaInstitut Laue Langevin, 38042 Grenoble, France.ORCID 0000-0002-5133-8584
François HohCBS, INSERM U1054, CNRS UMR 5048, Université de Montpellier, 34090 Montpellier, France.ORCID 0000-0002-2905-7081
Christian RoumestandCBS, INSERM U1054, CNRS UMR 5048, Université de Montpellier, 34090 Montpellier, France.ORCID 0000-0002-4082-3293
Philippe OgerUniversité de Lyon, UCBL, INSA Lyon, CNRS, MAP UMR 5240, 69621 Villeurbanne, France.ORCID 0000-0001-6298-6870
Judith PetersInstitut Laue Langevin, 38042 Grenoble, France.ORCID 0000-0001-5151-7710

Funding

Agence Nationale de la Recherche 17-CE11-0012-01French National Centre for Scientific Research Mission pour les Initiatives Transverses et Interdisciplinaires (OriginsUnder- Pressure and LifeAdapt research projects)
6 · The paper itself

Abstract

Life is thought to have appeared in the depth of the sea under high hydrostatic pressure. Nowadays, it is known that the deep biosphere hosts a myriad of life forms thriving under high-pressure conditions. However, the evolutionary mechanisms leading to their adaptation are still not known. Here, we show the molecular bases of these mechanisms through a joint structural and dynamical study of two orthologous proteins. We observed that pressure adaptation involves the decoupling of protein-water dynamics and the elimination of cavities in the protein core. This is achieved by rearranging the charged residues on the protein surface and using bulkier hydrophobic residues in the core. These findings will be the starting point in the search for a complete genomic model explaining high-pressure adaptation.

Indexed as

AcclimatizationAdaptation, PhysiologicalHydrostatic Pressurehigh pressure adaptationneutron scatteringorigins of lifeprotein dynamics

Identifiers

PMID35955607
PMCPMC9369236

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.