Evidence map›Paper›PMID 35955587›Full record

ArticleInternational journal of molecular sciences2022

CSatDTA: Prediction of Drug-Target Binding Affinity Using Convolution Model with Self-Attention.

Ashutosh Ghimire, Hilal Tayara, Zhenyu Xuan, Kil To Chong

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. [A protein-ligand binding affinity prediction model integrating multi-scale interaction features].Sheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Nature's cryptographic codebreakerFrontiers in microbiology · 2025
    Article
  8. Review
  9. Article
  10. Techniques and Strategies in Drug Design and Discovery.International journal of molecular sciences · 2024
    Article
  11. Review
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ashutosh GhimireDepartment of Electronics and Information Engineering, Jeonbuk National University, Jeonju 54896, Korea.ORCID 0000-0001-6210-1219
Hilal TayaraSchool of International Engineering and Science, Jeonbuk National University, Jeonju 54896, Korea.ORCID 0000-0001-5678-3479
Zhenyu XuanDepartment of Biological Sciences, The University of Texas at Dallas, Richardson, TX 75080, USA.
Kil To ChongDepartment of Electronics and Information Engineering, Jeonbuk National University, Jeonju 54896, Korea.ORCID 0000-0002-1952-0001

Funding

National Research Foundation of Korea 2020R1A2C2005612
6 · The paper itself

Abstract

Drug discovery, which aids to identify potential novel treatments, entails a broad range of fields of science, including chemistry, pharmacology, and biology. In the early stages of drug development, predicting drug-target affinity is crucial. The proposed model, the prediction of drug-target affinity using a convolution model with self-attention (CSatDTA), applies convolution-based self-attention mechanisms to the molecular drug and target sequences to predict drug-target affinity (DTA) effectively, unlike previous convolution methods, which exhibit significant limitations related to this aspect. The convolutional neural network (CNN) only works on a particular region of information, excluding comprehensive details. Self-attention, on the other hand, is a relatively recent technique for capturing long-range interactions that has been used primarily in sequence modeling tasks. The results of comparative experiments show that CSatDTA surpasses previous sequence-based or other approaches and has outstanding retention abilities.

Indexed as

Drug DiscoveryNeural Networks, ComputerDrug Developmentartificial intelligenceattentionbinding affinityconvolution neural networkdeep learningdrug discovery and developmentdrug–target interactionligandspharmacometricsproteins

Identifiers

PMID35955587
PMCPMC9369082

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.