Evidence map›Paper›PMID 35955517›Full record

ReviewInternational journal of molecular sciences2022

Single-Circulating Tumor Cell Whole Genome Amplification to Unravel Cancer Heterogeneity and Actionable Biomarkers.

Tanzila Khan, Therese M Becker, Joseph W Po, Wei Chua, Yafeng Ma

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Special Issue on Whole Genome Amplification.International journal of molecular sciences · 2023
    Article
  9. Review
  10. Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tanzila KhanSchool of Medicine, Western Sydney University, Campbelltown, NSW 2560, Australia.
Therese M BeckerSchool of Medicine, Western Sydney University, Campbelltown, NSW 2560, Australia.ORCID 0000-0002-5636-9902
Joseph W PoCentre of Circulating Tumor Cells Diagnostics & Research, Ingham Institute of Applied Medical Research, Liverpool, NSW 2170, Australia.
Wei ChuaSchool of Medicine, Western Sydney University, Campbelltown, NSW 2560, Australia.
Yafeng MaSchool of Medicine, Western Sydney University, Campbelltown, NSW 2560, Australia.ORCID 0000-0002-0522-8771
Camden and Campbelltown Hospitals · AUWestmead Hospital · AU

Funding

Ingham Institute InLuCC 2021Ingham Institute Narellan Rotary club breast cancer research grant
6 · The paper itself

Abstract

The field of single-cell analysis has advanced rapidly in the last decade and is providing new insights into the characterization of intercellular genetic heterogeneity and complexity, especially in human cancer. In this regard, analyzing single circulating tumor cells (CTCs) is becoming particularly attractive due to the easy access to CTCs from simple blood samples called "liquid biopsies". Analysis of multiple single CTCs has the potential to allow the identification and characterization of cancer heterogeneity to guide best therapy and predict therapeutic response. However, single-CTC analysis is restricted by the low amounts of DNA in a single cell genome. Whole genome amplification (WGA) techniques have emerged as a key step, enabling single-cell downstream molecular analysis. Here, we provide an overview of recent advances in WGA and their applications in the genetic analysis of single CTCs, along with prospective views towards clinical applications. First, we focus on the technical challenges of isolating and recovering single CTCs and then explore different WGA methodologies and recent developments which have been utilized to amplify single cell genomes for further downstream analysis. Lastly, we list a portfolio of CTC studies which employ WGA and single-cell analysis for genetic heterogeneity and biomarker detection.

Indexed as

Neoplastic Cells, CirculatingBiomarkers, TumorHumansLiquid BiopsyProspective StudiesSingle-Cell AnalysisBiomarkers, Tumorcancer biomarkercirculating tumor cell (CTC)liquid biopsysingle-cell analysiswhole genome amplification

Identifiers

PMID35955517
PMCPMC9369222
OpenAlexW4289134412

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.