Evidence map›Paper›PMID 35954314›Full record

ArticleCancers2022

Comparative Multicentric Evaluation of Inter-Observer Variability in Manual and Automatic Segmentation of Neuroblastic Tumors in Magnetic Resonance Images.

Diana Veiga-Canuto, Leonor Cerdà-Alberich, Cinta Sangüesa Nebot, Blanca Martínez de Las Heras, Ulrike Pötschger, Michela Gabelloni, José Miguel Carot Sierra, Sabine Taschner-Mandl, Vanessa Düster, Adela Cañete and 3 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Diana Veiga-CanutoGrupo de Investigación Biomédica en Imagen, Instituto de Investigación Sanitaria La Fe, Avenida Fernando Abril Martorell, 106 Torre A 7planta, 46026 Valencia, Spain.
Leonor Cerdà-AlberichGrupo de Investigación Biomédica en Imagen, Instituto de Investigación Sanitaria La Fe, Avenida Fernando Abril Martorell, 106 Torre A 7planta, 46026 Valencia, Spain.ORCID 0000-0002-5567-4278
Cinta Sangüesa NebotÁrea Clínica de Imagen Médica, Hospital Universitario y Politécnico La Fe, Avenida Fernando Abril Martorell, 106 Torre A 7planta, 46026 Valencia, Spain.
Blanca Martínez de Las HerasUnidad de Oncohematología Pediátrica, Hospital Universitario y Politécnico La Fe, Avenida Fernando Abril Martorell, 106 Torre A 7planta, 46026 Valencia, Spain.
Ulrike PötschgerSt. Anna Children's Cancer Research Institute, Zimmermannplatz 10, 1090 Vienna, Austria.
Michela GabelloniAcademic Radiology, Department of Translational Research, University of Pisa, Via Roma, 67, 56126 Pisa, Italy.ORCID 0000-0002-6668-499X
José Miguel Carot SierraDepartamento de Estadística e Investigación Operativa Aplicadas y Calidad, Universitat Politècnica de València, Camí de Vera s/n, 46022 Valencia, Spain.ORCID 0000-0001-6524-1639
Sabine Taschner-MandlSt. Anna Children's Cancer Research Institute, Zimmermannplatz 10, 1090 Vienna, Austria.ORCID 0000-0002-1439-5301
Vanessa DüsterSt. Anna Children's Cancer Research Institute, Zimmermannplatz 10, 1090 Vienna, Austria.
Adela CañeteUnidad de Oncohematología Pediátrica, Hospital Universitario y Politécnico La Fe, Avenida Fernando Abril Martorell, 106 Torre A 7planta, 46026 Valencia, Spain.
Ruth LadensteinSt. Anna Children's Cancer Research Institute, Zimmermannplatz 10, 1090 Vienna, Austria.
Emanuele NeriAcademic Radiology, Department of Translational Research, University of Pisa, Via Roma, 67, 56126 Pisa, Italy.ORCID 0000-0001-7950-4559
Luis Martí-BonmatíGrupo de Investigación Biomédica en Imagen, Instituto de Investigación Sanitaria La Fe, Avenida Fernando Abril Martorell, 106 Torre A 7planta, 46026 Valencia, Spain.ORCID 0000-0002-8234-010X
Hospital Universitari i Politècnic La Fe · ESSt Anna Children's Hospital · ATUniversity of Pisa · ITInstituto de Investigación Sanitaria La Fe · ESUniversitat Politècnica de València · ES

Funding

European Commission 826494
6 · The paper itself

Abstract

Tumor segmentation is one of the key steps in imaging processing. The goals of this study were to assess the inter-observer variability in manual segmentation of neuroblastic tumors and to analyze whether the state-of-the-art deep learning architecture nnU-Net can provide a robust solution to detect and segment tumors on MR images. A retrospective multicenter study of 132 patients with neuroblastic tumors was performed. Dice Similarity Coefficient (DSC) and Area Under the Receiver Operating Characteristic Curve (AUC ROC) were used to compare segmentation sets. Two more metrics were elaborated to understand the direction of the errors: the modified version of False Positive (FPRm) and False Negative (FNR) rates. Two radiologists manually segmented 46 tumors and a comparative study was performed. nnU-Net was trained-tuned with 106 cases divided into five balanced folds to perform cross-validation. The five resulting models were used as an ensemble solution to measure training (n = 106) and validation (n = 26) performance, independently. The time needed by the model to automatically segment 20 cases was compared to the time required for manual segmentation. The median DSC for manual segmentation sets was 0.969 (±0.032 IQR). The median DSC for the automatic tool was 0.965 (±0.018 IQR). The automatic segmentation model achieved a better performance regarding the FPRm. MR images segmentation variability is similar between radiologists and nnU-Net. Time leverage when using the automatic model with posterior visual validation and manual adjustment corresponds to 92.8%.

Indexed as

automatic segmentationdeep learninginter-observer variabilitymanual segmentationneuroblastic tumorstumor segmentation

Identifiers

PMID35954314
PMCPMC9367307
OpenAlexW4288060654

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.