Evidence map›Paper›PMID 35954239›Full record

ArticleCells2022

ContransGAN: Convolutional Neural Network Coupling Global Swin-Transformer Network for High-Resolution Quantitative Phase Imaging with Unpaired Data.

Hao Ding, Fajing Li, Xiang Chen, Jun Ma, Shouping Nie, Ran Ye, Caojin Yuan

Abstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. On the use of deep learning for phase recovery.Light, science & applications · 2024
    Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hao DingKey Laboratory for Opto-Electronic Technology of Jiangsu Province, Nanjing Normal University, Nanjing 210023, China.ORCID 0000-0001-5930-2351
Fajing LiKey Laboratory for Opto-Electronic Technology of Jiangsu Province, Nanjing Normal University, Nanjing 210023, China.
Xiang ChenKey Laboratory for Opto-Electronic Technology of Jiangsu Province, Nanjing Normal University, Nanjing 210023, China.
Jun MaSchool of Electronic Engineering and Optoelectronic Techniques, Nanjing University of Science and Technology, Nanjing 210094, China.
Shouping NieKey Laboratory for Opto-Electronic Technology of Jiangsu Province, Nanjing Normal University, Nanjing 210023, China.
Ran YeKey Laboratory for Opto-Electronic Technology of Jiangsu Province, Nanjing Normal University, Nanjing 210023, China.ORCID 0000-0003-3211-8866
Caojin YuanKey Laboratory for Opto-Electronic Technology of Jiangsu Province, Nanjing Normal University, Nanjing 210023, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Optical quantitative phase imaging (QPI) is a frequently used technique to recover biological cells with high contrast in biology and life science for cell detection and analysis. However, the quantitative phase information is difficult to directly obtain with traditional optical microscopy. In addition, there are trade-offs between the parameters of traditional optical microscopes. Generally, a higher resolution results in a smaller field of view (FOV) and narrower depth of field (DOF). To overcome these drawbacks, we report a novel semi-supervised deep learning-based hybrid network framework, termed ContransGAN, which can be used in traditional optical microscopes with different magnifications to obtain high-quality quantitative phase images. This network framework uses a combination of convolutional operation and multiheaded self-attention mechanism to improve feature extraction, and only needs a few unpaired microscopic images to train. The ContransGAN retains the ability of the convolutional neural network (CNN) to extract local features and borrows the ability of the Swin-Transformer network to extract global features. The trained network can output the quantitative phase images, which are similar to those restored by the transport of intensity equation (TIE) under high-power microscopes, according to the amplitude images obtained by low-power microscopes. Biological and abiotic specimens were tested. The experiments show that the proposed deep learning algorithm is suitable for microscopic images with different resolutions and FOVs. Accurate and quick reconstruction of the corresponding high-resolution (HR) phase images from low-resolution (LR) bright-field microscopic intensity images was realized, which were obtained under traditional optical microscopes with different magnifications.

Indexed as

MicroscopyNeural Networks, ComputerAlgorithmsCNNquantitative phase imagingsuper-resolutiontransformertransport of intensity equation

Identifiers

PMID35954239
PMCPMC9368182

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.