Evidence map›Paper›PMID 35953657›Full record

ArticleNature microbiology2022

A haem-sequestering plant peptide promotes iron uptake in symbiotic bacteria.

Siva Sankari, Vignesh M P Babu, Ke Bian, Areej Alhhazmi, Mary C Andorfer, Dante M Avalos, Tyler A Smith, Kwan Yoon, Catherine L Drennan, Michael B Yaffe and 2 more

Open access · greenAbstract read
In one paragraph

Article in Nature microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 66 citations in OpenAlex.

  1. Review
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  4. BacA(SbmA) importer of legume symbiotic NCR peptides: Protein architecture, function, and evolutionary implications.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  13. Mobile gene clusters and coexpressed plant-rhizobium pathways drive partner quality variation in symbiosis.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Siva SankariDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Vignesh M P BabuDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Ke BianDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Areej AlhhazmiDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Mary C AndorferDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Dante M AvalosDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Tyler A SmithDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Kwan YoonDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.
Catherine L DrennanDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Michael B YaffeDepartments of Biology and Biological Engineering, and Center for Precision Cancer Medicine, David H. Koch Institute for Integrative Cancer Research, Massachusetts Institute for Technology, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-9547-3251
Sebastian LouridoDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-5237-1095
Graham C WalkerDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA. gwalker@mit.edu.ORCID http://orcid.org/0000-0001-7243-8261
Massachusetts Institute of Technology · USHoward Hughes Medical Institute · USWhitehead Institute for Biomedical Research · USBeth Israel Deaconess Medical Center · USTaibah University · SA

Funding

Analysis and Characterization of Trauma-Induced CoagulopathyUM1HL120877 · NHLBI · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI MORRISSEY, JAMES H., WISNIEWSKI, STEPHEN R · 2013 to 2019
$26.6M
TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FOX, JAMES G · 1985 to 2020
$25.6M
MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008313 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MURTHY, VENKATESH N · 1989 to 2023
$14.6M
MOLEULAR GENETICS OF RHIZOBIUM PLASMIDSR01GM031030 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI WALKER, GRAHAM C · 1985 to 2020
$8.6M
Protein Kinase Signaling in the Genotoxic Stress ResponseR35ES028374 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YAFFE, MICHAEL B · 2017 to 2024
$3.9M
Metalloenzyme structure, function and assemblyR35GM126982 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CATHERINE L DRENNAN · 2018 to 2026
$3.4M
Development and maintenance of chronic toxoplasmosisR01AI158501 · NIAID · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI LOURIDO, SEBASTIAN · 2021 to 2025
$3.3M
Taming radical enzymes through directed evolution and structural analysisF32GM129882 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ANDORFER, MARY CATHERINE · 2018 to 2021
$193k
Acquisition of Octet Biolayer Interferometry system for MIT biophysics facilityS10OD016326 · OD · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI IMPERIALI, BARBARA · 2014 to 2014
$180k
Howard Hughes Medical InstituteNHLBI NIH HHS UM1 HL120877NIAID NIH HHS R01 AI158501NIEHS NIH HHS P30 ES002109NIEHS NIH HHS R35 ES028374NIGMS NIH HHS F32 GM129882NIGMS NIH HHS R01 GM031030NIGMS NIH HHS R35 GM126982NIGMS NIH HHS T32 GM008313NIH HHS S10 OD016326
6 · The paper itself

Abstract

Symbiotic partnerships with rhizobial bacteria enable legumes to grow without nitrogen fertilizer because rhizobia convert atmospheric nitrogen gas into ammonia via nitrogenase. After Sinorhizobium meliloti penetrate the root nodules that they have elicited in Medicago truncatula, the plant produces a family of about 700 nodule cysteine-rich (NCR) peptides that guide the differentiation of endocytosed bacteria into nitrogen-fixing bacteroids. The sequences of the NCR peptides are related to the defensin class of antimicrobial peptides, but have been adapted to play symbiotic roles. Using a variety of spectroscopic, biophysical and biochemical techniques, we show here that the most extensively characterized NCR peptide, 24 amino acid NCR247, binds haem with nanomolar affinity. Bound haem molecules and their iron are initially made biologically inaccessible through the formation of hexamers (6 haem/6 NCR247) and then higher-order complexes. We present evidence that NCR247 is crucial for effective nitrogen-fixing symbiosis. We propose that by sequestering haem and its bound iron, NCR247 creates a physiological state of haem deprivation. This in turn induces an iron-starvation response in rhizobia that results in iron import, which itself is required for nitrogenase activity. Using the same methods as for L-NCR247, we show that the D-enantiomer of NCR247 can bind and sequester haem in an equivalent manner. The special abilities of NCR247 and its D-enantiomer to sequester haem suggest a broad range of potential applications related to human health.

Indexed as

RhizobiumSymbiosisBacteriaCysteineHemeHumansIronNitrogenNitrogenasePeptidesCysteineHemeIronNitrogenNitrogenasePeptides

Identifiers

PMID35953657
PMCPMC9420810
OpenAlexW4292865459

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.