Evidence map›Paper›PMID 35953061›Full record

ArticleThe plant pathology journal2022

Comparing Protein Expression in Erwinia amylovora Strain TS3128 Cultured under Three Sets of Environmental Conditions.

Jongchan Lee, Junhyeok Choi, Jeongwook Lee, Yongmin Cho, In-Jeong Kang, Sang-Wook Han

Open access · goldAbstract read
In one paragraph

Article in The plant pathology journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jongchan LeeDepartment of Plant Science and Technology, Chung-Ang University, Anseong 17546, Korea.
Junhyeok ChoiDepartment of Plant Science and Technology, Chung-Ang University, Anseong 17546, Korea.
Jeongwook LeeDepartment of Plant Science and Technology, Chung-Ang University, Anseong 17546, Korea.
Yongmin ChoDepartment of Plant Science and Technology, Chung-Ang University, Anseong 17546, Korea.
In-Jeong KangDivision of Crop Cultivation and Environment Research, National Institute of Crop Science, Suwon 16613, Korea.
Sang-Wook HanDepartment of Plant Science and Technology, Chung-Ang University, Anseong 17546, Korea.
Chung-Ang University · KR

Funding

Chung-Ang UniversityRural Development Administration PJ014934
6 · The paper itself

Abstract

Erwinia amylovora, the causal agent of fire-blight disease in apple and pear trees, was first isolated in South Korea in 2015. Although numerous studies, including omics analyses, have been conducted on other strains of E. amylovora, studies on South Korean isolates remain limited. In this study, we conducted a comparative proteomic analysis of the strain TS3128, cultured in three media representing different growth conditions. Proteins related to virulence, type III secretion system, and amylovoran production, were more abundant under minimal conditions than in rich conditions. Additionally, various proteins associated with energy production, carbohydrate metabolism, cell wall/membrane/envelope biogenesis, and ion uptake were identified under minimal conditions. The strain TS3128 expresses these proteins to survive in harsh environments. These findings contribute to understanding the cellular mechanisms driving its adaptations to different environmental conditions and provide proteome profiles as reference for future studies on the virulence and adaptation mechanisms of South Korean strains.

Indexed as

Erwinia amylovoraminimal and rich media

Identifiers

PMID35953061
PMCPMC9372105
OpenAlexW4289336675

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.