Evidence map›Paper›PMID 35951356›Full record

ArticleACS sensors2022

A Superfolder Green Fluorescent Protein-Based Biosensor Allows Monitoring of Chloride in the Endoplasmic Reticulum.

Kaavian Shariati, Yaohuan Zhang, Simone Giubbolini, Riccardo Parra, Steven Liang, Austin Edwards, J Fielding Hejtmancik, Gian Michele Ratto, Daniele Arosio, Gregory Ku

Open access · hybridAbstract read
In one paragraph

Article in ACS sensors, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Chloride ions in health and disease.Bioscience reports · 2024
    Review
  7. Review
  8. Engineering highly stable variants of Corynactis californica green fluorescent proteins.Protein science : a publication of the Protein Society · 2024
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Kaavian ShariatiDiabetes Center, University of California San Francisco, San Francisco, California 94143, United States.
Yaohuan ZhangDiabetes Center, University of California San Francisco, San Francisco, California 94143, United States.
Simone GiubboliniNational Enterprise for NanoScience and NanoTechnology (NEST), Istituto Nanoscienze, Consiglio Nazionale delle Ricerche (CNR) and Scuola Normale Superiore Pisa, Pisa 56127, Italy.
Riccardo ParraNational Enterprise for NanoScience and NanoTechnology (NEST), Istituto Nanoscienze, Consiglio Nazionale delle Ricerche (CNR) and Scuola Normale Superiore Pisa, Pisa 56127, Italy.ORCID 0000-0003-1421-2832
Steven LiangDiabetes Center, University of California San Francisco, San Francisco, California 94143, United States.
Austin EdwardsBiological Imaging Development CoLab, University of California San Francisco, San Francisco, California 94143, United States.
J Fielding HejtmancikOphthalmic Genetics and Visual Function Branch, National Eye Institute, Bethesda, Maryland 20892-1860, United States.ORCID 0000-0002-4788-0362
Gian Michele RattoNational Enterprise for NanoScience and NanoTechnology (NEST), Istituto Nanoscienze, Consiglio Nazionale delle Ricerche (CNR) and Scuola Normale Superiore Pisa, Pisa 56127, Italy.ORCID 0000-0001-9632-7769
Daniele ArosioCNR, Institute of Biophysics, Via alla Cascata 56/C, Trento 38123, Italy.ORCID 0000-0003-2872-6906
Gregory KuDiabetes Center and Department of Medicine, Division of Endocrinology, University of California San Francisco, 513 Parnassus Avenue, Box 0534, San Francisco, California94143, United States.ORCID 0000-0001-5306-4225
University of California, San Francisco · USIstituto Nanoscienze · ITNational Eye Institute · USUniversity of Trento · IT

Funding

Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KRUMMEL, MATTHEW F · 2003 to 2019
$21.8M
The role of Spry2 in beta cell function and the unfolded protein responseR01DK107650 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KU, GREGORY MICHAEL · 2016 to 2020
$1.8M
The role of mitochondrial fission in beta cell functionR01DK118337 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KU, GREGORY MICHAEL · 2020 to 2023
$1.5M
Uncovering Two Novel Diabetes Drug Targets in the IDGR03DK124904 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KU, GREGORY MICHAEL · 2019 to 2019
$161k
NIDDK NIH HHS P30 DK063720NIDDK NIH HHS R01 DK107650NIDDK NIH HHS R01 DK118337NIDDK NIH HHS R03 DK124904
6 · The paper itself

Abstract

Though the concentration of chloride has been measured in the cytoplasm and in secretory granules of live cells, it cannot be measured within the endoplasmic reticulum (ER) due to poor fluorescence of existing biosensors. We developed a fluorescent biosensor composed of a chloride-sensitive superfolder GFP and long Stokes-shifted mKate2 for simultaneous chloride and pH measurements that retained fluorescence in the ER lumen. Using this sensor, we showed that the chloride concentration in the ER is significantly lower than that in the cytosol. This improved biosensor enables dynamic measurement of chloride in the ER and may be useful in other environments where protein folding is challenging.

Indexed as

Biosensing TechniquesChloridesEndoplasmic ReticulumGreen Fluorescent ProteinsProtein FoldingChloridesGreen Fluorescent Proteinsbiosensorchlorideendoplasmic reticulumpHsuperfolder

Identifiers

PMID35951356
PMCPMC9425558
OpenAlexW4291019962

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.