Evidence map›Paper›PMID 35951156›Full record

ArticleGenes & genomics2022

Regulation of UHRF1 acetylation by TIP60 is important for colon cancer cell proliferation.

Ye Joo Hong, Junyoung Park, Ja Young Hahm, Song Hyun Kim, Dong Ho Lee, Kwon-Sik Park, Sang-Beom Seo

Open access · hybridAbstract read
In one paragraph

Article in Genes & genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Ye Joo HongDepartment of Life Science, College of Natural Sciences, Chung-Ang University, 06974, Seoul, South Korea.
Junyoung ParkDepartment of Life Science, College of Natural Sciences, Chung-Ang University, 06974, Seoul, South Korea.
Ja Young HahmDepartment of Life Science, College of Natural Sciences, Chung-Ang University, 06974, Seoul, South Korea.
Song Hyun KimDepartment of Life Science, College of Natural Sciences, Chung-Ang University, 06974, Seoul, South Korea.
Dong Ho LeeDa Vinci College of General Education, Chung-Ang University, 06974, Seoul, South Korea.
Kwon-Sik ParkDepartment of Microbiology, Immunology, and Cancer Biology, University of Virginia School of Medicine, 22908, Charlottesville, VA, USA.
Sang-Beom SeoDepartment of Life Science, College of Natural Sciences, Chung-Ang University, 06974, Seoul, South Korea. sangbs@cau.ac.kr.ORCID 0000-0003-4709-6022
Chung-Ang University · KRUniversity of Virginia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundUbiquitin-like with PHD and RING finger domains 1 (UHRF1) is upregulated in colon cancer cells and associated with silencing tumor suppressor genes (TSGs) to promote colon cancer cell proliferation.

objectiveTo investigate epigenetic modification of UHRF1 by TIP60. Whether UHRF1 acetylation by TIP60 can induce cell proliferation in colon cancer cells.

methodsAcetylation sites of UHRF1 by TIP60 was predicted by ASEB (Acetylation Set Enrichment Based) method and identified by immunoprecipitation assay using anti-pan-acetyl lysine antibody and in vitro acetylation assay. Based on this method, UHRF1 acetylation-deficient mimic 4KR (K644R, K646R, K648R, K650R) mutant was generated to investigate effects of UHRF1 acetylation by TIP60. shRNA system was used to generate stable knockdown cell line of UHRF1. With transient transfection of UHRF1 WT and 4KR, the effects of UHRF1 4KR mutant on Jun dimerization protein 2 (JDP2) gene expression, cell proliferation and cell cycle were investigated by RT-qPCR and FACS analysis in shUHRF1 colon cancer cell line.

resultsDownregulation of TIP60-mediated UHRF1 acetylation is correlated with suppressed cell cycle progression. Acetylation-deficient mimic of UHRF1 showed poor cell growth through increased expression of JDP2 gene.

conclusionsAcetylation of UHRF1 4K residues by TIP60 is important for colon cancer cell growth. Furthermore, upregulated JDP2 expression by acetylation-deficient mutant of UHRF1 might be an important epigenetic target for colon cancer cell proliferation.

Indexed as

CCAAT-Enhancer-Binding ProteinsColonic NeoplasmsLysine Acetyltransferase 5Ubiquitin-Protein LigasesAcetylationCell ProliferationDNA MethylationHumansLysineRNA, Small InterferingUbiquitinsCCAAT-Enhancer-Binding ProteinsKAT5 protein, humanLysineLysine Acetyltransferase 5RNA, Small InterferingUbiquitin-Protein LigasesUbiquitinsUHRF1 protein, humanAcetylationColon cancerProliferationTIP60UHRF1

Identifiers

PMID35951156
PMCPMC9569301
OpenAlexW4291016021

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.