Evidence map›Paper›PMID 35948910›Full record

ArticleMalaria journal2022

Molecular characterization and genotype distribution of thioester-containing protein 1 gene in Anopheles gambiae mosquitoes in western Kenya.

Shirley A Onyango, Kevin O Ochwedo, Maxwell G Machani, Julius O Olumeh, Isaiah Debrah, Collince J Omondi, Sidney O Ogolla, Ming-Chieh Lee, Guofa Zhou, Elizabeth Kokwaro and 5 more

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 3 countries.

Shirley A OnyangoDepartment of Zoological Sciences, School of Science and Technology, Kenyatta University, Nairobi, Kenya.
Kevin O OchwedoSub-Saharan Africa International Centre of Excellence for Malaria Research, Homa bay, Kenya.
Maxwell G MachaniCentre for Global Health Research, Kenya Medical Research Institute, Kisumu, Kenya.
Julius O OlumehSub-Saharan Africa International Centre of Excellence for Malaria Research, Homa bay, Kenya.
Isaiah DebrahSub-Saharan Africa International Centre of Excellence for Malaria Research, Homa bay, Kenya.
Collince J OmondiSub-Saharan Africa International Centre of Excellence for Malaria Research, Homa bay, Kenya.
Sidney O Ogolla
Ming-Chieh LeeProgram in Public Health, College of Health Sciences, University of California at Irvine, Irvine, CA, 92697, USA.
Guofa ZhouProgram in Public Health, College of Health Sciences, University of California at Irvine, Irvine, CA, 92697, USA.
Elizabeth KokwaroDepartment of Zoological Sciences, School of Science and Technology, Kenyatta University, Nairobi, Kenya.
James W KazuraCenter for Global Health and Diseases, Case Western Reserve University, LC 4983, Cleveland, OH, 44106, USA.
Yaw A AfraneDepartment of Medical Microbiology, Medical School, University of Ghana, University of Ghana, Accra, Ghana.
Andrew K GithekoCentre for Global Health Research, Kenya Medical Research Institute, Kisumu, Kenya.
Daibin ZhongProgram in Public Health, College of Health Sciences, University of California at Irvine, Irvine, CA, 92697, USA. dzhong@uci.edu.ORCID http://orcid.org/0000-0002-2771-9598
Guiyun YanProgram in Public Health, College of Health Sciences, University of California at Irvine, Irvine, CA, 92697, USA. guiyuny@uci.edu.
University of California, Irvine · USKenya Medical Research Institute · KEKenyatta University · KEUniversity of Ghana · GHUniversity of Nairobi · KECenter for Global Health · USInternational Centre for Reproductive Health Kenya · KE

Funding

Vector Biology of Invasive Anopheles stephensi in Rural to Urban Landscapes in EthiopiaU19AI129326 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI Guiyun Yan · 2017 to 2026
$19.9M
Ecology of African Highland MalariaR01AI050243 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI YAN, GUIYUN · 2001 to 2018
$8.8M
Research Training in Mosquito Genomics and Bioinformat*D43TW001505 · FIC · UNIVERSITY OF CALIFORNIA-IRVINE · PI Guiyun Yan · 2000 to 2026
$6.0M
FIC NIH HHS D43 TW001505NIAID NIH HHS R01 AI050243NIAID NIH HHS U19 AI129326NIH HHS D43 TW001505NIH HHS R01 A1123074NIH HHS R01 AI050243NIH HHS U19 AI129326
6 · The paper itself

Abstract

backgroundEvolutionary pressures lead to the selection of efficient malaria vectors either resistant or susceptible to Plasmodium parasites. These forces may favour the introduction of species genotypes that adapt to new breeding habitats, potentially having an impact on malaria transmission. Thioester-containing protein 1 (TEP1) of Anopheles gambiae complex plays an important role in innate immune defenses against parasites. This study aims to characterize the distribution pattern of TEP1 polymorphisms among populations of An. gambiae sensu lato (s.l.) in western Kenya.

methodsAnopheles gambiae adult and larvae were collected using pyrethrum spray catches (PSC) and plastic dippers respectively from Homa Bay, Kakamega, Bungoma, and Kisumu counties between 2017 and 2020. Collected adults and larvae reared to the adult stage were morphologically identified and then identified to sibling species by PCR. TEP1 alleles were determined in 627 anopheles mosquitoes using restriction fragment length polymorphisms-polymerase chain reaction (RFLP-PCR) and to validate the TEP1 genotyping results, a representative sample of the alleles was sequenced.

resultsTwo TEP1 alleles (TEP1*S1 and TEP1*R2) and three corresponding genotypes (*S1/S1, *R2/S1, and *R2/R2) were identified. TEP1*S1 and TEP1*R2 with their corresponding genotypes, homozygous *S1/S1 and heterozygous *R2/S1 were widely distributed across all sites with allele frequencies of approximately 80% and 20%, respectively both in Anopheles gambiae and Anopheles arabiensis. There was no significant difference detected among the populations and between the two mosquito species in TEP1 allele frequency and genotype frequency. The overall low levels in population structure (F

conclusionGenotyping TEP1 has identified two common TEP1 alleles (TEP1*S1 and TEP1*R2) and three corresponding genotypes (*S1/S1, *R2/S1, and *R2/R2) in An. gambiae s.l. The TEP1 allele genetic diversity and population structure are low in western Kenya.

Indexed as

AnophelesMalariaAnimalsGenotypeKenyaLarvaMosquito VectorsAnopheles gambiaeGenetic diversityMalaria transmissionPopulation structureSignature of selectionThioester-containing protein 1

Identifiers

PMID35948910
PMCPMC9364548
OpenAlexW4290973977

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.