Evidence map›Paper›PMID 35948865›Full record

ArticleBMC genomic data2022

Genetic diversity of DGAT1 gene linked to milk production in cattle populations of Ethiopia.

Behailu Samuel, Dejenie Mengistie, Ermias Assefa, Mingue Kang, Chankyu Park, Hailu Dadi, Hunduma Dinka

Open access · goldAbstract read
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Article in BMC genomic data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Behailu SamuelDepartment of Applied Biology, Adama Science and Technology University, P. O. Box 1888, Adama, Ethiopia.
Dejenie MengistieBio and Emerging Technology Institute, P. O. Box 5954, Addis Ababa, Ethiopia.
Ermias AssefaBio and Emerging Technology Institute, P. O. Box 5954, Addis Ababa, Ethiopia.
Mingue KangDepartment of Stem Cell and Regenerative Biotechnology, Konkuk University, Seoul, South Korea.
Chankyu ParkDepartment of Stem Cell and Regenerative Biotechnology, Konkuk University, Seoul, South Korea.
Hailu DadiBio and Emerging Technology Institute, P. O. Box 5954, Addis Ababa, Ethiopia.
Hunduma DinkaDepartment of Applied Biology, Adama Science and Technology University, P. O. Box 1888, Adama, Ethiopia. hunduma.dinkaa@astu.edu.et.
Addis Ababa Science and Technology University · ETAdama Science and Technology University · ETKonkuk University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDiacylglycerol acyl-CoA acyltransferase 1 (DGAT1) has become a promising candidate gene for milk production traits because of its important role as a key enzyme in catalyzing the final step of triglyceride synthesis. Thus use of bovine DGAT1 gene as milk production markers in cattle is well established. However, there is no report on polymorphism of the DGAT1 gene in Ethiopian cattle breeds. The present study is the first comprehensive report on diversity, evolution, neutrality evaluation and genetic differentiation of DGAT1 gene in Ethiopian cattle population. The aim of this study was to characterize the genetic variability of exon 8 region of DGAT1 gene in Ethiopian cattle breeds.

resultsAnalysis of the level of genetic variability at the population and sequence levels with genetic distance in the breeds considered revealed that studied breeds had 11, 0.615 and 0.010 haplotypes, haplotype diversity and nucleotide diversity respectively. Boran-Holstein showed low minor allele frequency and heterozygosity, while Horro showed low nucleotide and haplotype diversities. The studied cattle DGAT1 genes were under purifying selection. The neutrality test statistics in most populations were negative and statistically non-significant (p > 0.10) and consistent with a populations in genetic equilibrium or in expansion. Analysis for heterozygosity, polymorphic information content and inbreeding coefficient revealed sufficient genetic variation in DGAT1 gene. The pairwise F

conclusionThe cattle populations studied were polymorphic for DGAT1 locus. The DGAT1 gene locus is extremely crucial and may provide baseline information for in-depth understanding, exploitation of milk gene variation and could be used as a marker in selection programmes to enhance the production potential and to accelerate the rate of genetic gain in Ethiopian cattle populations exposed to different agro ecology condition.

Indexed as

Acyl Coenzyme AMilkAnimalsCattleDiacylglycerol O-AcyltransferaseEthiopiaPhylogenyPolymorphism, GeneticAcyl Coenzyme ADiacylglycerol O-AcyltransferaseDGAT1Ethiopian Cattle breedsEvolutionGenetic diversitySequencing

Identifiers

PMID35948865
PMCPMC9364525
OpenAlexW4291019522

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.