Evidence map›Paper›PMID 35948766›Full record

ArticleNature structural & molecular biology2022

Conformational buffering underlies functional selection in intrinsically disordered protein regions.

Nicolás S González-Foutel, Juliana Glavina, Wade M Borcherds, Matías Safranchik, Susana Barrera-Vilarmau, Amin Sagar, Alejandro Estaña, Amelie Barozet, Nicolás A Garrone, Gregorio Fernandez-Ballester and 9 more

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed.

  1. Article
  2. Article
  3. AF-CALVADOS: AlphaFold-guided simulations of multi-domain proteins at the proteome level.Protein science : a publication of the Protein Society · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Generative design of intrinsically disordered protein regions with IDiom.bioRxiv : the preprint server for biology · 2026
    Article
  8. Review
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  16. Review
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  18. Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Nicolás S González-Foutel *Instituto de Investigaciones Biotecnológicas (IIBiO-CONICET), Universidad Nacional de San Martín, Buenos Aires, Argentina.
Juliana Glavina *Instituto de Investigaciones Biotecnológicas (IIBiO-CONICET), Universidad Nacional de San Martín, Buenos Aires, Argentina.
Wade M BorcherdsDepartment of Cell Biology, Microbiology, and Molecular Biology and, University of South Florida, Tampa, FL, USA.
Matías SafranchikInstituto de Investigaciones Biotecnológicas (IIBiO-CONICET), Universidad Nacional de San Martín, Buenos Aires, Argentina.
Susana Barrera-VilarmauDepartment of Biomedical Engineering, Center for Science & Engineering of Living Systems, Washington University in St. Louis, St. Louis, MO, USA.ORCID http://orcid.org/0000-0003-4868-6593
Amin SagarCentre de Biologie Structurale (CBS), Université de Montpellier, INSERM, CNRS, Montpellier, France.
Alejandro EstañaCentre de Biologie Structurale (CBS), Université de Montpellier, INSERM, CNRS, Montpellier, France.
Amelie BarozetLAAS-CNRS, Université de Toulouse, CNRS, Toulouse, France.
Nicolás A GarroneInstituto de Investigaciones Biotecnológicas (IIBiO-CONICET), Universidad Nacional de San Martín, Buenos Aires, Argentina.
Gregorio Fernandez-BallesterInstituto de Investigación, Desarrollo e Innovación en Biotecnología Sanitaria de Elche (IDiBE), Universidad Miguel Hernández, Elche, Alicante, Spain.
Clara Blanes-MiraInstituto de Investigación, Desarrollo e Innovación en Biotecnología Sanitaria de Elche (IDiBE), Universidad Miguel Hernández, Elche, Alicante, Spain.ORCID http://orcid.org/0000-0002-9625-6275
Ignacio E SánchezInstituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales (IQUIBICEN-CONICET), Universidad de Buenos Aires, Buenos Aires, Argentina.
Gonzalo de Prat-GayFundación Instituto Leloir e Instituto de Investigaciones Bioquímicas (IIB-CONICET), Ciudad Autónoma de Buenos Aires, Buenos Aires, Argentina.
Juan CortésLAAS-CNRS, Université de Toulouse, CNRS, Toulouse, France.ORCID http://orcid.org/0000-0002-4660-0306
Pau BernadóCentre de Biologie Structurale (CBS), Université de Montpellier, INSERM, CNRS, Montpellier, France.
Rohit V PappuDepartment of Biomedical Engineering, Center for Science & Engineering of Living Systems, Washington University in St. Louis, St. Louis, MO, USA. pappu@wustl.edu.ORCID http://orcid.org/0000-0003-2568-1378
Alex S HolehouseDepartment of Biomedical Engineering, Center for Science & Engineering of Living Systems, Washington University in St. Louis, St. Louis, MO, USA. alex.holehouse@wustl.edu.ORCID http://orcid.org/0000-0002-4155-5729
Gary W DaughdrillDepartment of Cell Biology, Microbiology, and Molecular Biology and, University of South Florida, Tampa, FL, USA. gdaughdrill@usf.edu.ORCID http://orcid.org/0000-0001-5655-6559
Lucía B ChemesInstituto de Investigaciones Biotecnológicas (IIBiO-CONICET), Universidad Nacional de San Martín, Buenos Aires, Argentina. lchemes@iib.unsam.edu.ar.ORCID http://orcid.org/0000-0003-0192-9906

Funding

Mechanisms of p53 activation during stress response (MPI)R01CA141244 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI JIANDONG CHEN, Gary W Daughdrill · 2009 to 2026
$5.3M
ROLE OF CHAIN LENGTH AND SEQUENCE CONTEXTS ON POLYGLUTAMINE OLIGOMERIZATIONR01NS056114 · NINDS · WASHINGTON UNIVERSITY · PI PAPPU, ROHIT V · 2007 to 2020
$4.4M
Regulation of transcriptional activation by protein disorderR01GM115556 · NIGMS · UNIVERSITY OF SOUTH FLORIDA · PI CHEN, JIANDONG, DAUGHDRILL, GARY W · 2016 to 2023
$2.6M
NCI NIH HHS R01 CA141244NIGMS NIH HHS R01 GM115556NINDS NIH HHS R01 NS056114
6 · The paper itself

Abstract

Many disordered proteins conserve essential functions in the face of extensive sequence variation, making it challenging to identify the mechanisms responsible for functional selection. Here we identify the molecular mechanism of functional selection for the disordered adenovirus early gene 1A (E1A) protein. E1A competes with host factors to bind the retinoblastoma (Rb) protein, subverting cell cycle regulation. We show that two binding motifs tethered by a hypervariable disordered linker drive picomolar affinity Rb binding and host factor displacement. Compensatory changes in amino acid sequence composition and sequence length lead to conservation of optimal tethering across a large family of E1A linkers. We refer to this compensatory mechanism as conformational buffering. We also detect coevolution of the motifs and linker, which can preserve or eliminate the tethering mechanism. Conformational buffering and motif-linker coevolution explain robust functional encoding within hypervariable disordered linkers and could underlie functional selection of many disordered protein regions.

Indexed as

Intrinsically Disordered ProteinsAdenovirus E1A ProteinsAmino Acid SequenceProtein BindingProtein DomainsRetinoblastoma ProteinAdenovirus E1A ProteinsIntrinsically Disordered ProteinsRetinoblastoma Protein

Identifiers

PMID35948766
PMCPMC10262780

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.