Evidence map›Paper›PMID 35948746›Full record

ArticlePharmaceutical research2022

Molecular Dynamics Modeling Based Investigation of the Effect of Freezing Rate on Lysozyme Stability.

Tibo Duran, Bruna Minatovicz, Ryan Bellucci, Jun Bai, Bodhisattwa Chaudhuri

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Article in Pharmaceutical research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

5 authors.

Tibo DuranDepartment of Pharmaceutical Sciences, School of Pharmacy, University of Connecticut, Storrs, CT, 06269, USA.
Bruna MinatoviczDrug Product Development, BioTherapeutics Development, Janssen Research and Development, Malvern, PA, 19355, USA.
Ryan BellucciDepartment of Chemical & Biomolecular Engineering, University of Connecticut, Storrs, CT, 06269, USA.
Jun BaiDepartment of Computer Sciences and Engineering, University of Connecticut, Storrs, CT, 06269, USA.
Bodhisattwa ChaudhuriDepartment of Pharmaceutical Sciences, School of Pharmacy, University of Connecticut, Storrs, CT, 06269, USA. bodhi.chaudhuri@uconn.edu.ORCID http://orcid.org/0000-0002-1286-0871

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThe stability of protein drug products frozen during fill finish operations is greatly affected by the freezing rate applied. Non-optimal freezing rates may lead to the denaturation of protein's complex macromolecular conformation. However, limited work has been done to address the effect of different freezing rates on protein stability at nano-scale level.

methodsThe stability of a model protein, lysozyme, was investigated at atomic and molecular scale under varying freezing rates and moving ice-water interface. Ice seeding approach was adopted to initiate ice formation in this present simulation.

resultsThe faster freezing rate (11-12 K/490 ns) applied resulted in overall smaller ice fraction within the simulation box with a larger freeze-concentrated liquid (FCL) region. Consequently, the faster freezing rate better maintained protein stability with less secondary structure deviations, higher hydration level and structural compactness, and less fluctuations at individual residues than observed following slow (5-6 K/490 ns) and medium (7-8 K/490 ns) freezing rates. The present study also identified the residues near and within helices 3, 6, 7, and 8 dominate the structural instability of the lysozyme at 247 K freezing temperature.

conclusionsFor the first time, ice formation in therapeutic protein solution was studied "non-isothermally" at different freezing rates using molecular dynamics simulations. Thus, a good understanding of freezing rates on protein instability was revealed by applying the developed computational model.

Indexed as

IceMolecular Dynamics SimulationFreezingMuramidaseProteinsWaterIceMuramidaseProteinsWaterfreezing rateice-water interfacemolecular dynamics simulationsprotein stability

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