Evidence map›Paper›PMID 35947650›Full record

ArticleNucleic acids research2022

TGS1 impacts snRNA 3'-end processing, ameliorates survival motor neuron-dependent neurological phenotypes in vivo and prevents neurodegeneration.

Lu Chen, Caitlin M Roake, Paolo Maccallini, Francesca Bavasso, Roozbeh Dehghannasiri, Pamela Santonicola, Natalia Mendoza-Ferreira, Livia Scatolini, Ludovico Rizzuti, Alessandro Esposito and 20 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Sm complex assembly and 5' cap trimethylation promote selective processing of snRNAs by the 3' exonuclease TOE1.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Article
  8. Robust and sensitiveCell reports methods · 2022
    Article
  9. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

30 authors at 11 institutions in 3 countries.

Lu ChenStanford Cancer Institute, Stanford University School of Medicine, Stanford, CA 94305, USA.
Caitlin M RoakeDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
Paolo MaccalliniDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Francesca BavassoDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Roozbeh DehghannasiriDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305, USA.
Pamela SantonicolaInstitute of Biosciences and BioResources, IBBR, CNR, Naples, Italy.ORCID 0000-0002-4094-9996
Natalia Mendoza-FerreiraInstitute of Human Genetics, Center for Molecular Medicine Cologne, Institute for Genetics, University of Cologne, 50931 Cologne, Germany.
Livia ScatoliniDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Ludovico RizzutiDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Alessandro EspositoInstitute of Genetics and Biophysics, IGB-ABT, CNR, Naples, Italy.
Ivan GallottaInstitute of Genetics and Biophysics, IGB-ABT, CNR, Naples, Italy.
Sofia FranciaIFOM-The FIRC Institute of Molecular Oncology, Milan, Italy.
Stefano CacchioneDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Alessandra GalatiDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Valeria PalumboDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Marie A KobinCancer Signaling and Epigenetics Program and Cancer Epigenetics Institute, Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Gian Gaetano TartagliaDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Alessio ColantoniDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Gabriele ProiettiCenter for Life Nano- & Neuro-Science, Fondazione Istituto Italiano di Tecnologia (IIT), Rome 00161, Italy.
Yunming WuCancer Signaling and Epigenetics Program and Cancer Epigenetics Institute, Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Matthias HammerschmidtInstitute for Zoology, Developmental Biology, University of Cologne, 50674 Cologne, Germany.
Cristiano De PittàDepartment of Biology, University of Padova, Padua, Italy.ORCID 0000-0001-8013-8162
Gabriele SalesDepartment of Biology, University of Padova, Padua, Italy.
Julia SalzmanDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305, USA.
Livio PellizzoniCenter for Motor Neuron Biology and Disease, Columbia University, NY 10032, USA.
Brunhilde WirthInstitute of Human Genetics, Center for Molecular Medicine Cologne, Institute for Genetics, University of Cologne, 50931 Cologne, Germany.ORCID 0000-0003-4051-5191
Elia Di SchiaviInstitute of Biosciences and BioResources, IBBR, CNR, Naples, Italy.ORCID 0000-0002-8179-6666
Maurizio GattiDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.
Steven E ArtandiDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
Grazia D RaffaDipartimento di Biologia e Biotecnologie, Sapienza University of Rome, Rome, Italy.ORCID 0000-0002-5072-5240
Sapienza University of Rome · ITStanford University · USFox Chase Cancer Center · USItalian Institute of Technology · ITUniversity of Cologne · DEInstitute of Biosciences and Bioresources · ITInstitute of Genetics and Biophysics · ITUniversity of Padua · ITColumbia University · USIFOM · ITInstitute of Molecular Biology and Pathology · IT

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007365 · NIGMS · STANFORD UNIVERSITY · PI CHUA, KATRIN F · 1985 to 2021
$33.8M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
REVERSING CELLULAR IMMORTALITY IN CANCERR35CA197563 · NCI · STANFORD UNIVERSITY · PI ARTANDI, STEVEN E · 2015 to 2021
$6.4M
RNA-Mediated Mechanisms of Motor System Dysfunction in Spinal Muscular AtrophyR01NS102451 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Livio Pellizzoni · 2017 to 2026
$3.9M
Determining the role of TCAB1 in shaping telomerase functionR01AG056575 · NIA · STANFORD UNIVERSITY · PI ARTANDI, STEVEN E · 2017 to 2021
$2.3M
Telomerase RNP Prisonbreaks from Phase-Separated Nuclear BodyR35GM150538 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI Lu Chen · 2023 to 2026
$2.1M
NCI NIH HHS R35 CA197563NIA NIH HHS R01 AG056575NIGMS NIH HHS R35 GM150538NIGMS NIH HHS T32 GM007365NIH HHS P40 OD010440NINDS NIH HHS R01 NS102451
6 · The paper itself

Abstract

Trimethylguanosine synthase 1 (TGS1) is a highly conserved enzyme that converts the 5'-monomethylguanosine cap of small nuclear RNAs (snRNAs) to a trimethylguanosine cap. Here, we show that loss of TGS1 in Caenorhabditis elegans, Drosophila melanogaster and Danio rerio results in neurological phenotypes similar to those caused by survival motor neuron (SMN) deficiency. Importantly, expression of human TGS1 ameliorates the SMN-dependent neurological phenotypes in both flies and worms, revealing that TGS1 can partly counteract the effects of SMN deficiency. TGS1 loss in HeLa cells leads to the accumulation of immature U2 and U4atac snRNAs with long 3' tails that are often uridylated. snRNAs with defective 3' terminations also accumulate in Drosophila Tgs1 mutants. Consistent with defective snRNA maturation, TGS1 and SMN mutant cells also exhibit partially overlapping transcriptome alterations that include aberrantly spliced and readthrough transcripts. Together, these results identify a neuroprotective function for TGS1 and reinforce the view that defective snRNA maturation affects neuronal viability and function.

Indexed as

MethyltransferasesMotor NeuronsRNA, Small NuclearAnimalsCaenorhabditis elegansDrosophilaDrosophila melanogasterHeLa CellsHumansPhenotypeMethyltransferasesRNA, Small Nucleartrimethylguanosine synthase

Identifiers

PMID35947650
PMCPMC9757054
OpenAlexW4290988726

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.