ArticleBMC genomics2022
Comparative analysis of the chloroplast and mitochondrial genomes of Saposhnikovia divaricata revealed the possible transfer of plastome repeat regions into the mitogenome.
Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
22 citing papers in PubMed, 64 citations in OpenAlex.
- Organellar genome evolution in Camellia tianeensis (Theaceae): comparative insights into RNA editing, codon usage, and DNA transfer between chloroplast and mitochondrion.BMC genomics · 2026Article
- Assembly and characterization of the complete mitochondrial genome ofFrontiers in plant science · 2026Article
- Mitochondrial genome assembly and analysis of Cercis chinensis: insights into an economically valuable ornamental species.BMC plant biology · 2025Article
- Comparative analysis of the mitogenomes of multiple species of Fagaceae, with special focus on Quercus gilva.BMC plant biology · 2025Article
- Insights into the nuclear-organelle DNA integration in Cicuta virosa (Apiaceae) provided by complete plastid and mitochondrial genomes.BMC genomics · 2025Article
- Comparative analysis of mitochondrial genomes of Stemona tuberosa lour. reveals heterogeneity in structure, synteny, intercellular gene transfer, and RNA editing.BMC plant biology · 2025Article
- Interactions between chloroplast and mitochondrial genomes in 11Frontiers in plant science · 2025Article
- Comparative mitochondrial genomics of Terniopsis yongtaiensis in Malpighiales: structural, sequential, and phylogenetic perspectives.BMC genomics · 2024Article
- Assembly and comparative analysis of the complete mitochondrial and chloroplast genome of Cyperus stoloniferus (Cyperaceae), a coastal plant possessing saline-alkali tolerance.BMC plant biology · 2024Article
- Genomic, transcriptomic, and metabolomic analyses provide insights into the evolution and development of a medicinal plantHorticulture research · 2024Article
- De Novo Assembly and Comparative Analysis of Mitochondrial Genomes of TwoInternational journal of molecular sciences · 2024Article
- Article
- The first mitochondrial genome of Calophyllum soulattri Burm.f.Scientific reports · 2024Article
- Decoding the complete organelle genomic architecture of Stewartia gemmata: an early-diverging species in Theaceae.BMC genomics · 2024Article
- Comprehensive analysis of the mitochondrial genome ofFrontiers in plant science · 2024Article
- Organelle genome assembly, annotation, and comparative analyses ofFrontiers in plant science · 2024Article
- Mitochondrial genome complexity inFrontiers in genetics · 2024Article
- Features and evolutionary adaptations of the mitochondrial genome ofFrontiers in plant science · 2024Article
- Factors contributing to mitogenome size variation and a recurrent intracellular DNA transfer in Melastoma.BMC genomics · 2023Article
- Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundSaposhnikovia divaricata (Turcz.) Schischk. is a perennial herb whose dried roots are commonly used as a source of traditional medicines. To elucidate the organelle-genome-based phylogeny of Saposhnikovia species and the transfer of DNA between organelle genomes, we sequenced and characterised the mitochondrial genome (mitogenome) of S. divaricata.
resultsThe mitogenome of S. divaricata is a circular molecule of 293,897 bp. The nucleotide composition of the mitogenome is as follows: A, 27.73%; T, 27.03%; C, 22.39%; and G, 22.85. The entire gene content is 45.24%. A total of 31 protein-coding genes, 20 tRNAs and 4 rRNAs, including one pseudogene (rpl16), were annotated in the mitogenome. Phylogenetic analysis of the organelle genomes from S. divaricata and 10 related species produced congruent phylogenetic trees. Selection pressure analysis revealed that most of the mitochondrial genes of related species are highly conserved. Moreover, 2 and 46 RNA-editing sites were found in the chloroplast genome (cpgenome) and mitogenome protein-coding regions, respectively. Finally, a comparison of the cpgenome and the mitogenome assembled from the same dataset revealed 10 mitochondrial DNA fragments with sequences similar to those in the repeat regions of the cpgenome, suggesting that the repeat regions might be transferred into the mitogenome.
conclusionsIn this study, we assembled and annotated the mitogenome of S. divaricata. This study provides valuable information on the taxonomic classification and molecular evolution of members of the family Apiaceae.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.