Evidence map›Paper›PMID 35945314›Full record

ArticleMycopathologia2022

Cokeromyces recurvatus Incidentally Found in a Patient with Gastric Outlet Obstruction.

Bitania Wondimu, Benjamin Bradley, Joshua A Lieberman, Seth Cohen, Lynda Bui, Deepti Reddi

Erratum issuedAbstract readCase Reports
PubMed Publisher
In one paragraph

Article in Mycopathologia, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. mBio · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Bitania WondimuDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, USA. bmw35@uw.edu.ORCID http://orcid.org/0000-0002-9578-3743
Benjamin BradleyDepartment of Pathology, University of Utah, Salt Lake City, USA.ORCID http://orcid.org/0000-0002-8064-9314
Joshua A LiebermanDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, USA.ORCID http://orcid.org/0000-0002-0376-1337
Seth CohenDivision of Infectious Diseases, Department of Medicine, School of Medicine, University of Washington, Seattle, USA.
Lynda BuiDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, USA.
Deepti ReddiDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, USA.
University of Washington · USUniversity of Utah · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Isolation of Cokeromyces recurvatus, a dimorphic mucormycete fungus, from clinical specimens poses a diagnostic challenge to physicians and laboratorians as this organism may represent a rare colonizer or true pathogen. Here, we report a case of Cokeromyces recurvatus present in a circumferential duodenal lesion. The patient is a 64-year-old with no past medical history, admitted with a three-week history of left upper quadrant abdominal pain. Computerized tomography scan identified duodenitis with significant gastric outlet obstruction, confirmed by the presence of a partially obstructing non-bleeding duodenal ulcer on upper endoscopy. Histology showed variably sized spherical structures without nuclei, reproductive tracts, or alimentary tracts. Small, clustered spherules representing putative endospores were observed within the larger structures and in the exudate. Based on the histology, the differential included Coccidioides spp, Emmonsia spp, or Chrysosporium spp. Additionally, gastric biopsies revealed concurrent Helicobacter pylori gastritis. The fungus was identified as C. recurvatus by broad-range fungal polymerase chain reaction performed on formalin-fixed paraffin-embedded biopsy tissue, as well as morphology and DNA sequencing of the cultured isolate. The fungus had low MICs to all major antifungal classes; however, in the context of the Helicobacter pylori infection, the patient was only treated with amoxicillin and clarithromycin with improvement in his symptoms before hospital discharge. Only three cases of Cokeromyces recurvatus isolated from the GI tract have been reported; this case highlights a unique clinical presentation in the small bowel in a patient without underlying medical conditions.

Indexed as

Gastric Outlet ObstructionHelicobacter InfectionsHelicobacter pyloriMucoralesHumansMiddle AgedCokeromycesduodenitisMucoralesmucormycete

Identifiers

PMID35945314
OpenAlexW4290975452

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.