Evidence map›Paper›PMID 35945307›Full record

ArticleNeurochemical research2022

Pathogenesis and Therapeutic Targets of Focal Cortical Dysplasia Based on Bioinformatics Analysis.

Ying Kan, Lijuan Feng, Yukun Si, Ziang Zhou, Wei Wang, Jigang Yang

Abstract read
PubMed Publisher
In one paragraph

Article in Neurochemical research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Identification and validation of mBMC oral health · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ying Kan *Department of Nuclear Medicine, Beijing Friendship Hospital, Capital Medical University, Beijing, 100050, China.
Lijuan Feng *Department of Nuclear Medicine, Beijing Friendship Hospital, Capital Medical University, Beijing, 100050, China.
Yukun SiDepartment of Nuclear Medicine, Beijing Friendship Hospital, Capital Medical University, Beijing, 100050, China.
Ziang ZhouDepartment of Nuclear Medicine, Beijing Friendship Hospital, Capital Medical University, Beijing, 100050, China.
Wei WangDepartment of Nuclear Medicine, Beijing Friendship Hospital, Capital Medical University, Beijing, 100050, China.
Jigang YangDepartment of Nuclear Medicine, Beijing Friendship Hospital, Capital Medical University, Beijing, 100050, China. yangjigang@ccmu.edu.cn.ORCID http://orcid.org/0000-0002-0538-7676
Capital Medical University · CN

Funding

Capital's Funds for Health Improvement and Research 2020-2-2025National Key Research and Development Plan 2020YFC0122000National Natural Science Foundation of China 81971642National Natural Science Foundation of China 82001861National Natural Science Foundation of China 82102088
6 · The paper itself

Abstract

Focal cortical dysplasia (FCD), a malformation of cortical development, is the most common cause of intractable epilepsy in children. However, the causes and underlying molecular events of FCD need further investigation. The microarray dataset GSE62019 and GSE97365 were obtained from Gene Expression Omnibus. To examine critical genes and signaling pathways, bioinformatics analysis tools such as protein-protein interaction (PPI) networks, miRNA-mRNA interaction networks, and immune infiltration in FCD samples were used to fully elucidate the pathogenesis of FCD. A total of 534 differentially expressed genes (DEGs) and 71 differentially expressed miRNAs (DEMs) were obtained. The DEGs obtained were enriched in ribosomal, protein targeting, and pathways of neurodegeneration multiple diseases, whereas the target genes of DEMs were enriched in signaling pathways such as transforming growth factor beta, Wnt, PI3K-Akt, etc. Finally, four hub genes (RPL11, FAU, RPS20, RPL27) and five key miRNAs (hsa-let-7b, hsa-miR-185, hsa-miR-23b, hsa-miR-222 and hsa-miR-92b) were obtained by PPI network, miRNA-mRNA network, and ROC analysis. The immune infiltration results showed that the infiltration levels of five immune cells (MDSC, regulatory T cells, activated CD8

Indexed as

Malformations of Cortical DevelopmentMicroRNAsBiomarkersCD8-Positive T-LymphocytesChildComputational BiologyGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktRNA, MessengerTransforming Growth Factor betaBiomarkersMicroRNAsPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktRNA, MessengerTransforming Growth Factor betaBioinformatics analysisFocal cortical dysplasiaImmune infiltrationMicroarrayMolecular mechanism

Identifiers

PMID35945307
OpenAlexW4290779445

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.