Evidence map›Paper›PMID 35943274›Full record

ArticleMicrobiology spectrum2022

Improving Suspected Pulmonary Infection Diagnosis by Bronchoalveolar Lavage Fluid Metagenomic Next-Generation Sequencing: a Multicenter Retrospective Study.

Xiao Jin, Juan Li, Mingyue Shao, Xuedong Lv, Ningfei Ji, Yehan Zhu, Mao Huang, Feichao Yu, Changwen Zhang, Lixu Xie and 5 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed, 2 pooled it
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 2 syntheses or guidelines pooled it, 85 citations in OpenAlex.

  1. Pooled it
  2. Hemoptysis caused byFrontiers in public health · 2023
    Pooled it
  3. Application of targeted next-generation sequencing in children with community-acquired pneumonia.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Xiao Jin *Department of Respiratory Medicine, The Second Clinical Medical School of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Juan Li *Department of Pulmonary and Critical Care Medicine, The Second Affiliated Hospital of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Mingyue Shao *Department of Respiratory Medicine, The Second Clinical Medical School of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Xuedong LvDepartment of Pulmonary and Critical Care Medicine, The Second Affiliated Hospital of Nantong University, Nantong, China.
Ningfei JiDepartment of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Yehan ZhuDepartment of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Soochow University, Suzhou, China.
Mao HuangDepartment of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Feichao YuDepartment of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Changwen ZhangDepartment of Respiratory Medicine, The Second Clinical Medical School of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Lixu XieDepartment of Respiratory Medicine, The Second Clinical Medical School of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Jianling HuangDepartment of Respiratory Medicine, The Second Clinical Medical School of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Sixi ChenDepartment of Respiratory Medicine, The Second Clinical Medical School of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Changjun ZhuDepartment of Respiratory Medicine, The Second Clinical Medical School of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.ORCID 0000-0002-0681-8562
Minjie LvDepartment of Respiratory Medicine, The Second Clinical Medical School of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.
Ganzhu FengDepartment of Pulmonary and Critical Care Medicine, The Second Affiliated Hospital of Nanjing Medical Universitygrid.89957.3a, Nanjing, Jiangsu, China.ORCID 0000-0003-3926-1753
Second Affiliated Hospital of Nanjing Medical University · CNJiangsu Province Hospital · CNNantong University · CNSoochow University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metagenomic next-generation sequencing (mNGS) has been gradually applied to clinical practice due to its unbiased characteristics of pathogen detection. However, its diagnostic performance and clinical value in suspected pulmonary infection need to be evaluated. We systematically reviewed the clinical data of 246 patients with suspected pulmonary infection from 4 medical institutions between January 2019 and September 2021. The diagnostic performances of mNGS and conventional testing (CT) were systematically analyzed based on bronchoalveolar lavage fluid (BALF). The impacts of mNGS and CT on diagnosis modification and treatment adjustment were also assessed. The positive rates of mNGS and CT were 47.97% and 23.17%, respectively. The sensitivity of mNGS was significantly higher than that of CT (53.49% versus 23.26%,

Indexed as

Communicable DiseasesMycobacterium tuberculosisPneumoniaVirusesBronchoalveolar Lavage FluidFungiHigh-Throughput Nucleotide SequencingHumansMetagenomicsMulticenter Studies as TopicRetrospective StudiesSensitivity and SpecificityBALFmNGSpathogenpulmonary infection

Identifiers

PMID35943274
PMCPMC9431624
OpenAlexW4292401354

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.