Evidence map›Paper›PMID 35941544›Full record

ArticleBMC genomics2022

Evolutionary analysis and functional characterization of BZR1 gene family in celery revealed their conserved roles in brassinosteroid signaling.

Chunliu Zuo, Lan Zhang, Xinyue Yan, Xinyue Guo, Qing Zhang, Songyang Li, Yanling Li, Wen Xu, Xiaoming Song, Jinpeng Wang and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Evaluation of the genes CYPEnvironmental science and pollution research international · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Chunliu Zuo *College of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Lan Zhang *College of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Xinyue Yan *College of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Xinyue GuoCollege of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Qing ZhangCollege of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Songyang LiCollege of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Yanling LiCollege of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Wen XuCollege of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Xiaoming SongCollege of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Jinpeng WangCollege of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China.
Min YuanCollege of Life Sciences, North China University of Science and Technology, Tangshan, 063210, Hebei, China. yuanmin308@163.com.
North China University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBrassinosteroids (BRs) are a group of essential steroid hormones involved in diverse developmental and physiological processes in plants. The Brassinazole-resistant 1 (BZR1) transcription factors are key components of BR signaling and integrate a wide range of internal and environmental signals to coordinate plant development, growth, and resistance to abiotic and biotic stresses. Although the BZR1 family has been fully studied in Arabidopsis, celery BZR1 family genes remain largely unknown.

resultsNine BZR1 genes were identified in the celery genome, and categorized into four classes based on phylogenetic and gene structure analyses. All the BZR1 proteins shared a typical bHLH (basic helix-loop-helix) domain that is highly conserved across the whole family in Arabidopsis, grape, lettuce, ginseng, and three Apiaceae species. Both duplications and losses of the BZR1 gene family were detected during the shaping of the celery genome. Whole-genome duplication (WGD) or segmental duplication contributed 55.56% of the BZR1 genes expansion, and the γ as well as celery-ω polyploidization events made a considerable contribution to the production of the BZR1 paralogs in celery. Four AgBZR1 members (AgBZR1.1, AgBZR1.3, AgBZR1.5, and AgBZR1.9), which were localized both in the nucleus and cytoplasm, exhibit transcription activation activity in yeast. AgBZR1.5 overexpression transgenic plants in Arabidopsis showed curled leaves with bent, long petioles and constitutive BR-responsive phenotypes. Furthermore, the AgBZR1 genes possessed divergent expression patterns with some overlaps in roots, petioles, and leaves, suggesting an extensive involvement of AgBZR1s in the developmental processes in celery with both functional redundancy and divergence.

conclusionsOur results not only demonstrated that AgBZR1 played a conserved role in BR signaling but also suggested that AgBZR1 might be extensively involved in plant developmental processes in celery. The findings lay the foundation for further study on the molecular mechanism of the AgBZR1s in regulating the agronomic traits and environmental adaptation of celery, and provide insights for future BR-related genetic breeding of celery and other Apiaceae crops.

Indexed as

ApiumArabidopsisArabidopsis ProteinsBrassinosteroidsDNA-Binding ProteinsGene Expression Regulation, PlantPhylogenyTriazolesArabidopsis ProteinsbrassinazoleBrassinosteroidsBZR1 protein, ArabidopsisDNA-Binding ProteinsTriazolesBrassinosteroidsBZR1CeleryConstitutive BR-responsive phenotypesWhole-genome duplication

Identifiers

PMID35941544
PMCPMC9361572
OpenAlexW4295717558

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.