Evidence map›Paper›PMID 35941228›Full record

ArticleJournal of cancer research and clinical oncology2023

Genome-wide CRISPR knockout screening identified G protein pathway suppressor 2 as a novel tumor suppressor for uveal melanoma metastasis.

Shuangshuang Shi, Haojie Chen, Hanqing Wang, JianFeng Wan, Yi Shi, Jia Li, Shuo Wang, Jie Shi, Jianying Lv, Tong Wu and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of cancer research and clinical oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Shuangshuang Shi *Tianjin Key Laboratory of Retinal Functions and Diseases, Tianjin Branch of National Clinical Research Center for Ocular Disease, Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, Tianjin, 300384, China.
Haojie Chen *Tianjin Key Laboratory of Retinal Functions and Diseases, Tianjin Branch of National Clinical Research Center for Ocular Disease, Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, Tianjin, 300384, China.
Hanqing WangTianjin Key Laboratory of Retinal Functions and Diseases, Tianjin Branch of National Clinical Research Center for Ocular Disease, Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, Tianjin, 300384, China.
JianFeng WanTianjin Key Laboratory of Retinal Functions and Diseases, Tianjin Branch of National Clinical Research Center for Ocular Disease, Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, Tianjin, 300384, China.
Yi ShiThe School of Medicine, Nankai University, Tianjin, 300071, China.
Jia LiThe School of Medicine, Nankai University, Tianjin, 300071, China.
Shuo WangThe School of Medicine, Nankai University, Tianjin, 300071, China.
Jie ShiThe School of Medicine, Nankai University, Tianjin, 300071, China.
Jianying LvThe School of Medicine, Nankai University, Tianjin, 300071, China.
Tong WuSichuan Eye Hospital, AIER Eye Hospital Group, No. 153, Tianfu Fourth Street, High-tech Zone, Chengdu, 610047, China.
Longlong WangThe School of Medicine, Nankai University, Tianjin, 300071, China.
Fengyuan SunTianjin Key Laboratory of Retinal Functions and Diseases, Tianjin Branch of National Clinical Research Center for Ocular Disease, Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, Tianjin, 300384, China. eyesunfengyuan@163.com.
Nankai University · CNTianjin Medical University · CNTianjin Medical University Eye Hospital · CN

Funding

Science and Technology Project of the Health Committee of Binhai New Area 2019BWKZ009
6 · The paper itself

Abstract

purposeUveal melanoma (UM) is the most common intraocular malignant tumor in adults. Due to the lack of effective treatments for metastatic UM, the survival of UM has not changed over the past 3 decades. Therefore, it is important to identify essential genes regulating the metastasis of UM.

methodsIn this study, a genome-wide CRISPR knockout screen in an orthotopic mouse model of UM was performed to identify the regulatory genes conferring the metastatic phenotype. Loss-of-function analyses were performed to explore the function of G protein pathway suppressor 2 (GPS2) in UM metastasis in vitro and in vivo. RNA sequencing was performed to investigate the molecular mechanism underlying the function of GPS2 as a tumor suppressor in UM.

resultsAmong the highest-ranking genes, we found several validated tumor suppressors, such as SHPRH, GPS2, PRPH2, and hsa-mir-1229; GPS2 was chosen as the candidate gene for further studies. GPS2 was lower expressed in the tumor tissues of UM patients. Furthermore, knocking-down GPS2 promoted the proliferation and metastatic abilities of UM cells both in vivo and in vitro. Finally, analysis of the transcriptome data revealed that silencing GPS2 upregulates oncogenic signaling pathways MAPK and PI3K-Akt, and in the meantime downregulates tumor suppressor signaling pathway Slit/Robo in UM cells.

conclusionAltogether, our study proved that the GPS2 gene functions as a tumor suppressor and might be a novel potential therapeutic target for UM treatment.

Indexed as

MelanomaUveal NeoplasmsAnimalsCell Line, TumorClustered Regularly Interspaced Short Palindromic RepeatsGenes, RegulatorGTP-Binding ProteinsIntracellular Signaling Peptides and ProteinsMicePhosphatidylinositol 3-KinasesUveal MelanomaGPS2 protein, mouseGTP-Binding ProteinsIntracellular Signaling Peptides and ProteinsPhosphatidylinositol 3-KinasesCRISPR/Cas9CRISPR screenGPS2MetastasisUveal melanoma

Identifiers

PMID35941228
PMCPMC11797865
OpenAlexW4290722915

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.