Evidence map›Paper›PMID 35940046›Full record

ArticleThe Journal of surgical research2022

Four Immune Modulating Genes in Primary Melanoma That Predict Metastatic Potential.

Jennifer Erdrich, Kristel Lourdault, Alex Judd, David Kaufman, Ke Wei Gong, Melanie Gainsbury, Nan Deng, Wonwoo Shon, Richard Essner

Open access · greenAbstract read
In one paragraph

Article in The Journal of surgical research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Jennifer ErdrichUniversity of Arizona, Tucson, Arizona.
Kristel LourdaultSaint John's Cancer Institute, Santa Monica, California.
Alex JuddUniversity of Arizona, Tucson, Arizona. Electronic address: alexjudd@email.arizona.edu.
David KaufmanCedars Sinai Medical Center, Los Angeles, California.
Ke Wei GongDavid Geffen School of Medicine at UCLA, Los Angeles, California.
Melanie GainsburyKaiser Permanente, Santa Clara, California.
Nan DengCedars Sinai Medical Center, Los Angeles, California.
Wonwoo ShonCedars Sinai Medical Center, Los Angeles, California.
Richard EssnerSaint John's Cancer Institute, Santa Monica, California.
Cedars-Sinai Medical Center · USSaint John's Health Center · USUniversity of Arizona · USKaiser Permanente Santa Clara Medical Center · USUniversity of California, Los Angeles · US

Funding

Surgery and the Mechanisms of Lymph Node Metastases in Cutaneous MelanomaR01CA120228 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ESSNER, RICHARD · 2007 to 2011
$1.4M
NCI NIH HHS R01 CA120228
6 · The paper itself

Abstract

introductionHistologic characteristics cannot adequately predict which patients are at risk of developing metastatic disease after excision of primary cutaneous melanoma. The aim of this study was to identify immunomodulatory genes in primary tumors associated with development of distant metastases. MATERIALS AND

methodsThirty-seven patients with primary melanoma underwent surgical excision. RNA was extracted from the primary tumor specimens. cDNA was synthesized and used with Human Gene Expression microarray. Differential expression of 74 immunomodulatory genes was compared between patients who developed distant metastases and those who did not.

resultsSix of 37 patients developed distant metastases during the time of the study. Differential expression of microarray data showed upregulation of four immunomodulatory genes in this group. These four genes-c-CBL, CD276, CXCL1, and CXCL2-were all significantly overexpressed in the metastatic group with differential expression fold change of 1.15 (P = 0.01), 1.16 (P = 0.04), 2.51 (P < 0.001), and 1.68 (P < 0.02), respectively. CXCL1 had particularly high predictive value with an area under the curve of 0.80. Multivariate analysis showed only expression of CXCL1 (P = 0.01) remains predictive of distant metastases in melanoma patients. This result was confirmed using quantitative real-time polymerase chain reaction.

conclusionsCXCL1, CXCL2, c-CBL, and CD276 are immunomodulatory genes present in primary melanoma that are strongly associated with development of metastatic disease. Identification of their presence, particularly CXCL1, in the primary tumor could be used as a predictor of future risk of metastatic disease and thereby to identify patients who might benefit early from immunotherapy.

Indexed as

MelanomaSkin NeoplasmsB7 AntigensDNA, ComplementaryHumansLymphatic MetastasisRNAB7 AntigensCD276 protein, humanDNA, ComplementaryRNABiomarkersMelanomaMetastasisSkin cancersSurgeryTumor microenvironment

Identifiers

PMID35940046
PMCPMC9549765
OpenAlexW4289878972

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.