Evidence map›Paper›PMID 35939513›Full record

ArticlePLoS genetics2022

Regional and developmental characteristics of human embryo mosaicism revealed by single cell sequencing.

Yixin Ren, Zhiqiang Yan, Ming Yang, Laura Keller, Xiaohui Zhu, Ying Lian, Qi Liu, Rong Li, Fan Zhai, Yanli Nie and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Yixin RenDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.
Zhiqiang YanDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.
Ming YangDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.
Laura KellerDepartment of Obstetrics and Gynecology, University of Michigan, Ann Arbor, Michigan, United States of America.
Xiaohui ZhuDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.
Ying LianDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.
Qi LiuReproductive Medical Center, Henan Provincial People's Hospital, Zhengzhou City, Henan, China.
Rong LiDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.ORCID 0000-0003-0305-5579
Fan ZhaiDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.ORCID 0000-0001-5987-8262
Yanli NieDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.
Liying YanDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.ORCID 0000-0001-9572-9440
Gary D SmithDepartment of Obstetrics and Gynecology, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0003-4377-3348
Jie QiaoDepartment of Obstetrics and Gynecology, Peking University Third Hospital, Beijing, China.ORCID 0000-0003-2126-1376
Ministry of Education of the People's Republic of China · CNPeking University · CNUniversity of Michigan · USHenan Provincial People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromosomal mosaicism is common throughout human pre- and post-implantation development. However, the incidence and characteristics of mosaicism in human blastocyst remain unclear. Concerns and confusions still exist regarding the interpretation of chromosomal mosaicism on preimplantation genetic testing for aneuploidy (PGT-A) results and embryo development. Here, we aimed to estimate the genetic concordance between trophectoderm (TE), inner cell mass (ICM) and the corresponding human embryonic stem cells (hESCs), and to explore the characteristics of mosaicism in human blastocyst and hESCs on a single cell level. The single cell sequencing results of TE cells indicated that 65.71% of the blastocysts were mosaic (23 in 35 embryos), while the ICM sequencing results suggested that 60.00% of the blastocysts were mosaic (9 in 15 embryos). The incidence of mosaicism for the corresponding hESCs was 33.33% (2 in 6 embryos). No significant difference was observed between the mosaic rate of TE and that of ICM. However, the mosaic rate of the corresponding hESCs was significantly lower than that of TE and ICM cells, suggesting that the incidence of mosaicism may decline during embryonic development. Upon single cell sequencing, we found several "complementary" copy number variations (CNVs) that were usually not revealed in clinical PGT-A which used multi-cell DNA sequencing (or array analysis). This indicates the potential diagnostic risk of PGT-A based multi-cell analysis routinely in clinical practice. This study provided new insights into the characteristics, and considerable influences, of mosaicism on human embryo development, as well as the clinical risks of PGT-A based on multi-cell biopsies and bulk DNA assays.

Indexed as

MosaicismPreimplantation DiagnosisAneuploidyBlastocystDNA Copy Number VariationsFemaleGenetic TestingHigh-Throughput Nucleotide SequencingHumansPregnancy

Identifiers

PMID35939513
PMCPMC9387924
OpenAlexW4290667519

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.