Evidence map›Paper›PMID 35939393›Full record

ArticleeLife2022

Multistep loading of a DNA sliding clamp onto DNA by replication factor C.

Marina Schrecker, Juan C Castaneda, Sujan Devbhandari, Charanya Kumar, Dirk Remus, Richard K Hite

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 40 citations in OpenAlex.

  1. Mechanistic diversity of clamp loading at small DNA gaps.The Journal of biological chemistry · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. ThebioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. PCNA is a nucleotide exchange factor for the clamp loader ATPase complex.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Structure of the human CTF18-RFC clamp loader bound to PCNA.bioRxiv : the preprint server for biology · 2025
    Article
  11. PCNA is a Nucleotide Exchange Factor for the Clamp Loader ATPase Complex.bioRxiv : the preprint server for biology · 2025
    Article
  12. The proofreading mechanism of the human leading-strand DNA polymerase ε holoenzyme.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. DNA Damage and Replication Stress Checkpoints.Annual review of biochemistry · 2025
    Review
  14. Article
  15. Article
  16. Article
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  18. Article
  19. Cryo-EM reveals a nearly complete PCNA loading process and unique features of the human alternative clamp loader CTF18-RFC.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Marina Schrecker *Structural Biology Program, Memorial Sloan Kettering Cancer Center, New York, United States.ORCID 0000-0001-8542-6657
Juan C Castaneda *Weill Cornell Medicine Graduate School, Weill Cornell Medicine, New York, United States.
Sujan DevbhandariMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, United States.
Charanya KumarMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, United States.
Dirk RemusMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, United States.ORCID 0000-0002-5155-181X
Richard K HiteStructural Biology Program, Memorial Sloan Kettering Cancer Center, New York, United States.ORCID 0000-0003-0496-0669
Memorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Mechanism of DNA replication initiation in Saccharomyces cerevisiaeR01GM107239 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI REMUS, DIRK · 2014 to 2023
$3.9M
Molecular mechanisms of replication-coupled chromatin assemblyR01GM127428 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI REMUS, DIRK · 2019 to 2022
$2.0M
Molecular Biophysics Training ProgramT32GM132081 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI Olga Boudker, David Eliezer · 2020 to 2026
$1.3M
NCI NIH HHS P30 CA008748NIGMS NIH HHS R01 GM107239NIGMS NIH HHS R01 GM127428NIGMS NIH HHS T32 GM132081
6 · The paper itself

Abstract

The DNA sliding clamp proliferating cell nuclear antigen (PCNA) is an essential co-factor for many eukaryotic DNA metabolic enzymes. PCNA is loaded around DNA by the ATP-dependent clamp loader replication factor C (RFC), which acts at single-stranded (ss)/double-stranded DNA (dsDNA) junctions harboring a recessed 3' end (3' ss/dsDNA junctions) and at DNA nicks. To illuminate the loading mechanism we have investigated the structure of RFC:PCNA bound to ATPγS and 3' ss/dsDNA junctions or nicked DNA using cryogenic electron microscopy. Unexpectedly, we observe open and closed PCNA conformations in the RFC:PCNA:DNA complex, revealing that PCNA can adopt an open, planar conformation that allows direct insertion of dsDNA, and raising the question of whether PCNA ring closure is mechanistically coupled to ATP hydrolysis. By resolving multiple DNA-bound states of RFC:PCNA we observe that partial melting facilitates lateral insertion into the central channel formed by RFC:PCNA. We also resolve the Rfc1 N-terminal domain and demonstrate that its single BRCT domain participates in coordinating DNA prior to insertion into the central RFC channel, which promotes PCNA loading on the lagging strand of replication forks in vitro. Combined, our data suggest a comprehensive and fundamentally revised model for the RFC-catalyzed loading of PCNA onto DNA.

Indexed as

DNASaccharomyces cerevisiae ProteinsAdenosine TriphosphateDNA ReplicationProliferating Cell Nuclear AntigenProtein ConformationReplication Protein CAdenosine TriphosphateDNAProliferating Cell Nuclear AntigenReplication Protein CSaccharomyces cerevisiae ProteinsDNA repairDNA replicationmolecular biophysicsPCNAS. cerevisiaestructural biology

Identifiers

PMID35939393
PMCPMC9359705
OpenAlexW4290673089

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.