Evidence map›Paper›PMID 35937039›Full record

ArticleBioChem2021

A Novel FACS-Based Workflow for Simultaneous Assessment of RedOx Status, Cellular Phenotype, and Mitochondrial Genome Stability.

Patrick M McTernan, Paige S Katz, Constance Porretta, David A Welsh, Robert W Siggins

Abstract read
In one paragraph

Article in BioChem, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Patrick M McTernanComprehensive Alcohol Research Center, Louisiana State University Health Sciences Center, New Orleans, LA 70112, USA.ORCID 0000-0003-4857-7901
Paige S KatzDepartment of Physiology, Louisiana State University Health Sciences Center, New Orleans, LA 70112, USA.
Constance PorrettaComprehensive Alcohol Research Center, Louisiana State University Health Sciences Center, New Orleans, LA 70112, USA.
David A WelshComprehensive Alcohol Research Center, Louisiana State University Health Sciences Center, New Orleans, LA 70112, USA.
Robert W SigginsComprehensive Alcohol Research Center, Louisiana State University Health Sciences Center, New Orleans, LA 70112, USA.

Funding

Tracking & Evaluation CoreU54GM104940 · NIGMS · LSU PENNINGTON BIOMEDICAL RESEARCH CTR · PI JUDD E SHELLITO · 2012 to 2026
$69.1M
BIOMEDICAL ALCOHOL RESEARCH TRAINING PROGRAMT32AA007577 · NIAAA · LSU HEALTH SCIENCES CENTER · PI PATRICIA E. MOLINA · 1999 to 2026
$9.6M
PILOT--IMPACT OF ALCOHOLISM ON AIDS ASOCIATED MUSCLE WASTINGP50AA009803 · NIAAA · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI NELSON, STEVE · 1994 to 2003
$7.2M
Alcohol-induced Osteoimmunopathies: A Unifying Explanatory MechanismR00AA020312 · NIAAA · LSU HEALTH SCIENCES CENTER · PI SIGGINS, ROBERT WADE · 2013 to 2015
$732k
Alcohol-induced Osteoimmunopathies: A Unifying Explanatory MechanismK99AA020312 · NIAAA · LSU HEALTH SCIENCES CENTER · PI SIGGINS, ROBERT WADE · 2011 to 2012
$293k
NIAAA NIH HHS K99 AA020312NIAAA NIH HHS P50 AA009803NIAAA NIH HHS R00 AA020312NIAAA NIH HHS T32 AA007577NIGMS NIH HHS U54 GM104940
6 · The paper itself

Abstract

Intracellular reduction-oxidation (RedOx) status mediates a myriad of critical biological processes. Importantly, RedOx status regulates the differentiation of hematopoietic stem and progenitor cells (HSPCs), mesenchymal stromal cells (MSCs) and maturation of CD8+ T Lymphocytes. In most cells, mitochondria are the greatest contributors of intracellular reactive oxygen species (ROS). Excess ROS leads to mitochondrial DNA (mtDNA) damage and protein depletion. We have developed a fluorescence-activated cell sorting (FACS)-based protocol to simultaneously analyze RedOx status and mtDNA integrity. This simultaneous analysis includes measurements of ROS (reduced glutathione (GSH)), ATP5H (nuclear encoded protein), MTCO1 (mitochondrial DNA encoded protein), and cell surface markers to allow discrimination of different cell populations. Using the ratio of MTCO1 to ATP5H median fluorescence intensity (MFI), we can gain an understanding of mtDNA genomic stability, since MTCO1 levels are decreased when mtDNA becomes significantly damaged. Furthermore, this workflow can be optimized for sorting cells, using any of the above parameters, allowing for downstream quantification of mtDNA genome copies/nucleus by quantitative PCR (qPCR). This unique methodology can be used to enhance analyses of the impacts of pharmacological interventions, as well as physiological and pathophysiological processes on RedOx status along with mitochondrial dynamics in most cell types.

Indexed as

FACSmitochondriamitohormesismtDNARedOx status

Identifiers

PMID35937039
PMCPMC9355044

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.